Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5258 |
Symbol | |
ID | 5154676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5484179 |
End bp | 5485825 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640560027 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001241151 |
Protein GI | 148256566 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.170302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CCATCCTCGA CATCGACAAT CTCGTCGTCA CCGTCGGCAA GACGAAGAAC CCGAACGGGC CGCGCATCAT CGACGGCGTG TCGATCAAGG TCGCCAAGGG CGAGACGCTG TGCGTCGTCG GCGAGAGCGG CTCGGGCAAG TCCGTGACCT CGCTGACCAC GATGGGCCTG TTGCCGAAGA ACGCGCTGCA TGCCGTCGGC GGCAGCGTCA AGCTGGTCGG CGAGGAACTG CTCACCGCCA GCGATCGCCG GCTGCGCGAA CTGCGCGCCA CACGGATGGC GATGATCTTC CAGGAGCCGA TGACCGCGCT CAATCCGGTC GTTCCGGTCG GCCGCCAGAT CGACGAGGTG TTGCGCGCGC ATACGTCCCT CGACGCAAGG GCGCGCCGCA AGCGCATCCT CGACATGATG GAGCAGGTCC ACCTGCCCGA CGTCGAGCGC ATCTTCGCCT CCTACCCACA CCGCCTGTCC GGCGGCCAGC GCCAGCGCAT CATGATCGCG ATGGCTTTGG TGCTGGAGCC GAAGCTCCTG ATCGCCGACG AGCCGACGAC TGCCCTCGAC GTCACCACGC AGAAGCAGAT CCTCTCGCTG ATCCGCGAAC TGCAGCGCGA TCACGGCACG GCGGTGTTGT TCATCACCCA CGACATGGGC GTCGTCGCCG AGATCGCCGA TCGCGTATCC GTCATGCGCC AGGGCCGCCT GGTCGAGACC GGCCCGCTCG ACAAGATCCT GCGCAGCCCG GAAATGGACT ACACGCGCAA CCTGCTCGCC GCGGTGCCGA GCCTGATCCC GCGGCCGCCG CGGCCCGAGA CCAGCGAGCC GGTGGTGTTG GAGACCAACG AGCTCGGCAA GGTCTATCGC GAGCGCTCGT TCATCGGCAA AGCGCGCGAG GTCGTCGCCG CGCAGAACGT CACCCTCACC TTGCGCAAGG GCCGCACGCT CGGCATCGTC GGCGAGAGCG GCTCCGGCAA GTCGACGGTG GCGCGCTGCA TCGTGCGCCT GATCGATCCG ACTTCGGGCG GCGTCCGTCT GGCGGGCAAC GAGATCTCGA TCCTGACGCG CCGGCTGCTG CAGCCGCACC GCAAGCGCAT CCAGATCGTG TTCCAGGATC CCTACCGCTC GCTCAACCCG CGGCTGACGG TCGGCGAGAG CATCGCCGAG GGCCCGGTCA ATTACGGCAC CTCGCACGAT AAGGCGATGG CGCGGGCGCG CGAGCTACTC GAGCTGGTCG GCCTGCCCGC GGACGCGATC TCGCGCTACC CGCACCAGTT CTCCGGCGGC CAGCGCCAGC GCATCGCGAT CGCGCGCGCG CTCGCGCTCG ATCCGGACGT GCTGGTGGCC GACGAAGCGG TCTCCGCGCT CGACGTCTCG GTGCAGGCCC AGGTGCTGGA GCTGCTCGAC GAGATCCAGC GCCGGCTCGG GATCGCGATC CTGTTCATCA CCCACGATCT GCGTGTCGCC GCCCAGATCT GCGATGACGT CGTGGTGATG CAGAAGGGCC GCATCGTCGA ACAGGGTCCG GCCGGCGAGA TCCTGACCCA TCCGAAGGAA GCCTACACCA GGTCCCTGCT CGAAGCCGCA CCCGGCCGCC ACTGGGATTT CGCCAACTTC CGCCCGGTGT CGGAGGCCGT GGCGTAA
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Protein sequence | MTDTILDIDN LVVTVGKTKN PNGPRIIDGV SIKVAKGETL CVVGESGSGK SVTSLTTMGL LPKNALHAVG GSVKLVGEEL LTASDRRLRE LRATRMAMIF QEPMTALNPV VPVGRQIDEV LRAHTSLDAR ARRKRILDMM EQVHLPDVER IFASYPHRLS GGQRQRIMIA MALVLEPKLL IADEPTTALD VTTQKQILSL IRELQRDHGT AVLFITHDMG VVAEIADRVS VMRQGRLVET GPLDKILRSP EMDYTRNLLA AVPSLIPRPP RPETSEPVVL ETNELGKVYR ERSFIGKARE VVAAQNVTLT LRKGRTLGIV GESGSGKSTV ARCIVRLIDP TSGGVRLAGN EISILTRRLL QPHRKRIQIV FQDPYRSLNP RLTVGESIAE GPVNYGTSHD KAMARARELL ELVGLPADAI SRYPHQFSGG QRQRIAIARA LALDPDVLVA DEAVSALDVS VQAQVLELLD EIQRRLGIAI LFITHDLRVA AQICDDVVVM QKGRIVEQGP AGEILTHPKE AYTRSLLEAA PGRHWDFANF RPVSEAVA
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