Gene BBta_5097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5097 
Symbol 
ID5151934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5321951 
End bp5323186 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content68% 
IMG OID640559873 
Productbeta-lactamase family penicillin binding protein 
Protein accessionYP_001241001 
Protein GI148256416 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGT CCACCGCCGC CCCCAGCGTG CCCTTTTCCG CGCTGCGCTC CCTGAGCCCC 
CCGCTGCCCG ATGATCGGCC GGAGGCTCTC GGTCTCTCGA CCGCGCGGCT GCAGCGGGCC
TCGGATGCCT TCAAGCGCGA GGTCGACAAG GGAACCCTCC CCGGCGCCAC CCTGTTGGTC
GGCCGGCGCG GCCGGATCGG TTGGTTCGAC GCCATCGGCC GCCAGGCGCC GGACTCGGAC
ATACCGATGC GGCCGGATTC GATCTTCCGT ATCTTCTCGA TGACCAAGCC GATCGTTTCG
CTGGGGATCA TGATGCTGGT CGAGGACGGC GAGCTGTTGC TGTCCGATCC CGTCGCCAAG
TTCATCCCGG AATTCGCCGA CCAGAAGGTC GGCATCGACA AGGCCGGCAA GCTCGAGCTG
GTGCCGGTCG CCCAGCCGAT GACGGTGCAG GACCTGCTGC GCCACACCTC GGGCCTGGCC
TATGAGCACA CGGGCTCCTC GCCGGTGCAC CAGCTCTACC AGCAATCGCG GGTGCGCAGC
CGCAAGATCA GCAATGCCGA GCACGCTTCG ATCGTCGCCG GCCTGCCGCT GATCTGCCAG
CCGGGCGCCG AGTTCAACTA CAGCCGCTCA ACCGACATTC TCGGACGGAT CATCGAGGTC
GTCGCGGGCC AGTCGCTCGG GGCGTTCCTG TCGGCGCGCA TCCTGTCGCC GCTCGGCATG
AACGAGACCG GCTTCTTCAC GAGCGAGGCC AATGCCGGCC GGCTCGCCGA GCCGTTCGCC
AAGGATCCCT GGACCGGCGA GGCGGTCAAT GTGTTCAAGA TGACCGAGCA GCCGGTGATG
GAATCCGGCG GCGGCGGCCT GGTCGCAACC ACCATGGACT ATGCCCGCTT CTGCGCGATG
CTGCTCAACA AGGGCAGCCT CGATGGGACA AGGCTGGTCG GCCGCAAGAC GCTGGAGTTG
ATGGCCTCCG ACCATCTCGG TCCCGACGTG AAGACGGTCG GTACCCTGCT GTCGCCCGGT
CACGGCTTCG GCCTCGGCTT CGCCGTCCGC CGCGAGGCCG GCATCGCCCC CTTCCCCGGC
TCGCCCGGCA CCTTCTTCTG GAGCGGCATC GCCGGCACGT TCTTCTGGAT CGATCCGAAA
GAGGAGCTGT TCTGCGTCTT CATGGCCCAG GCGCCAGGGC AGCGGGACTA TCTGCGCACG
CTGGTGCGCG ACGTGGTGTA CGCGGCGGTG GAGTGA
 
Protein sequence
MTPSTAAPSV PFSALRSLSP PLPDDRPEAL GLSTARLQRA SDAFKREVDK GTLPGATLLV 
GRRGRIGWFD AIGRQAPDSD IPMRPDSIFR IFSMTKPIVS LGIMMLVEDG ELLLSDPVAK
FIPEFADQKV GIDKAGKLEL VPVAQPMTVQ DLLRHTSGLA YEHTGSSPVH QLYQQSRVRS
RKISNAEHAS IVAGLPLICQ PGAEFNYSRS TDILGRIIEV VAGQSLGAFL SARILSPLGM
NETGFFTSEA NAGRLAEPFA KDPWTGEAVN VFKMTEQPVM ESGGGGLVAT TMDYARFCAM
LLNKGSLDGT RLVGRKTLEL MASDHLGPDV KTVGTLLSPG HGFGLGFAVR REAGIAPFPG
SPGTFFWSGI AGTFFWIDPK EELFCVFMAQ APGQRDYLRT LVRDVVYAAV E