| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5046 |
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| Symbol | rpoA |
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| ID | 5149761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5275178 |
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| End bp | 5276209 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640559824 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001240953 |
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| Protein GI | 148256368 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0408631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.958591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAAA CAGTGACGAT CCAGAAGAAT TGGCAAGAAT TGATTCGGCC GAACAAGCTC
CAGGTCACGC CGGGCTCCGA CGCGACCCGT TTCGCCACCG TGGTTGCCGA GCCGCTGGAG
CGCGGTTTCG GCCAGACGCT GGGCAATGCG CTCCGCCGCA TCCTGCTGTC GTCGCTGCAG
GGCGCCGCAG TGCAGTCGGT GCACATCGAT GGCGTGCTGC ACGAGTTCTC CTCGATCGCG
GGCGTCCGTG AGGACGTCAC CGACATCGTG CTGAACATCA AGGATATCTC GATCAAGATG
CAGGGCGAGG GCCCGAAGCG GATGGTCGTG AAGAAGCAGG GTCCGGGCGC CGTCACCGCC
GGCGATATCC AGACCGTCGG CGACATCGTC GTGCTCAATC CCGACCTGCA GCTCTGCACC
CTGGACGAGG GCGCCGAGAT CCGCATGGAG TTCACGGTCG CGACCGGCAA GGGCTACGTG
CCGGCCGAGC GCAACCGTCC TGAGGACGCG CCGATCGGCC TGATCCCGAT CGACAGCCTG
TTCTCGCCGG TCCGCAAGGT CTCCTACAAG GTCGAGAACA CCCGCGAGGG CCAGATCCTC
GACTACGACA AGCTGACCAT GACGATCGAG ACCAACGGCG CGATCTCGCC GGAGGACGCG
GTGGCCTACG CCGCTCGCAT CCTGCAGGAT CAGCTCAACG TCTTCGTCAA CTTCGAAGAG
CCGCGCAAGG AAGTTGCCCA GGAGATCATT CCGGATCTCG CCTTCAATCC GGCGTTCCTC
AAGAAGGTGG ACGAACTCGA GCTGTCGGTG CGTTCGGCGA ACTGCCTGAA GAACGACAAC
ATCGTCTATA TCGGCGACCT CGTGCAGAAG TCGGAAGCGG AGATGCTGCG CACCCCGAAC
TTCGGCCGCA AGTCGCTGAA CGAGATCAAG GAAGTGCTGG CTCAGATGGG TCTGCATCTC
GGCATGGAAG TGCCTGGCTG GCCGCCGGAG AATATCGACG AACTGGCCAA GCGCTTCGAG
GATCACTACT GA
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| Protein sequence | MGETVTIQKN WQELIRPNKL QVTPGSDATR FATVVAEPLE RGFGQTLGNA LRRILLSSLQ
GAAVQSVHID GVLHEFSSIA GVREDVTDIV LNIKDISIKM QGEGPKRMVV KKQGPGAVTA
GDIQTVGDIV VLNPDLQLCT LDEGAEIRME FTVATGKGYV PAERNRPEDA PIGLIPIDSL
FSPVRKVSYK VENTREGQIL DYDKLTMTIE TNGAISPEDA VAYAARILQD QLNVFVNFEE
PRKEVAQEII PDLAFNPAFL KKVDELELSV RSANCLKNDN IVYIGDLVQK SEAEMLRTPN
FGRKSLNEIK EVLAQMGLHL GMEVPGWPPE NIDELAKRFE DHY
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