| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5034 |
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| Symbol | |
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| ID | 5150443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5261342 |
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| End bp | 5262718 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640559812 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_001240941 |
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| Protein GI | 148256356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC GCATCAAGCG AACCCAGACC CGATCCGACC GACCGACCGA CCGTCGCAAA
GGCGAGCGGC CGAAGGCCGA AGCCGTGCGG AGCGCGCCTG CCAAGCGCGA TTCGCCGAAG
CGTGAGGCGA GCAAGCGCCC GGAGAGCGAC CGTCCGCGGC GCGAGCGTCT TGGCGGGGAA
CGCGAGGCCG CGTCGCGCAG CGAGTTCGGG CGCGGCAAGG CACGTCCGCC CCGTGCCGAG
CGCGACGAGC GTCGGGAGAC GTTCGAGCCG CGTGGCAAGC GCGTCGCCGC CGGCAAGCCC
GTGCGGTTCG GCGCCGAGCG GGCCGAACGC AAGCCCGTCG CCGCACCGCC ACCGCAGAAG
GCCGAGCCCG AGACGCCGCT GCTGCCGACC AAGGTGCAGA CCGTCGTGGT GACGGCGGAC
GAGAACAACA TGCGCGTCGA CCGCTTCCTC GAGGCGCGCT TTCCCGGCCT GTCATTCTCC
CACATCCAGC GCATCGTCCG TAAAGGCGAG TTGCGCGTCG ACGGCAAGCG CGCCGACAGC
AAGGATCGTC TGGAGGAGGG CCAGACCGTC CGCATTCCGC CGCTGAAGCT CGACGCGCCG
AAGGAGCGTG CCGGCCTCTC CGAGGCGGAG CGCAAGACGC TCGAGAGCCT CAAGGCGATG
ACGCTGTACG AGGACGACGA CGTGCTCGTC CTCAACAAGC CGGTCGGGCT TGCGGTGCAA
GGCGGCTCCG GCATGACGCG CCATATCGAC CAGATGCTGG AGGTGATGCG CGACGCCAAG
GGCCAGAAGC CGCGGCTCGT GCACCGCATC GACCGCGAGA CCTCGGGCTG TCTCCTGATC
GCCAAGACCC GCTTCGCCGC GACGCATCTG ACCGGCGCCT TCCGCAGCCG TTCGGCGCGC
AAGATCTATT GGGCGCTGGT GGCCGGCGTG CCCAAGCCGA AGCAGGGCCG CATCTCGACC
TATCTCGCCA AAGACGAGGG CGAGGACGAC ACCATCATGC GGGTCGCCGC CCATGGCGAC
GAGGGCGCCA GCCACGCCGT GACCTATTAT GCGGTCGTCG AGGCCTCGGC CAACAAGCTC
GCTTGGGTGT CGCTGAAGCC GGTGACCGGC CGCACGCATC AGCTGCGCGC GCATATGGCC
CATATCGGCC ATCCCATCGT CGGCGACCCC AAATATTTCA ACATCGAGAA CTGGGCGCTG
CCCGGCGGCC TGCAGAACCG GCTGCATCTC TTAGCCCGCC GCATCGTCAT CCCGCATCCG
CGCGGCGGTG TCATCGACGC GACCGCGCCG CTGCCGCCGC ATATGCTGCA ATCTTGGAAC
CTGCTCGGCC TCGAGCACGA CCGCTTCGAC CCGATCGAGA ACGCGCCGGA GGAGTGA
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| Protein sequence | MSRRIKRTQT RSDRPTDRRK GERPKAEAVR SAPAKRDSPK REASKRPESD RPRRERLGGE
REAASRSEFG RGKARPPRAE RDERRETFEP RGKRVAAGKP VRFGAERAER KPVAAPPPQK
AEPETPLLPT KVQTVVVTAD ENNMRVDRFL EARFPGLSFS HIQRIVRKGE LRVDGKRADS
KDRLEEGQTV RIPPLKLDAP KERAGLSEAE RKTLESLKAM TLYEDDDVLV LNKPVGLAVQ
GGSGMTRHID QMLEVMRDAK GQKPRLVHRI DRETSGCLLI AKTRFAATHL TGAFRSRSAR
KIYWALVAGV PKPKQGRIST YLAKDEGEDD TIMRVAAHGD EGASHAVTYY AVVEASANKL
AWVSLKPVTG RTHQLRAHMA HIGHPIVGDP KYFNIENWAL PGGLQNRLHL LARRIVIPHP
RGGVIDATAP LPPHMLQSWN LLGLEHDRFD PIENAPEE
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