Gene BBta_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5020 
Symbol 
ID5149746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5249801 
End bp5250805 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID640559800 
Productputative alpha/beta hydrolase 
Protein accessionYP_001240929 
Protein GI148256344 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.479747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTT TCGCCGTCGC GCTCTGCGCT GCCCTGCTCG CCTTCTTGCC TGCCATCGCT 
CCGGCTGCGG AAGGCCCGCG CGAGCCCTAT GGCATCAATC TCGAAGGGTT CCCCTATCCC
TTTCCCGTCA ACCTGCTGCC GCTGGTCAAT GACGGTGAGC AATTGCGCAT GGCCTATATG
GATGTCGCCC CCGCGCAGCC GAACGGGCGC ACCGCGCTGC TGCTGCACGG TCGCAATTTT
CCGTCGAGCT ATTGGGCCCC GGTGATCAAG ACGCTGACCG AGCAGGGCTT CCGGGTCGTT
GTGCCCGACC AGGTCGGGTT CGGGAAATCA ACCAAACCAT CCGGCGAGCT GCATTTCGAC
ACGCTGGCGC GCAACACGGT GGCCCTGCTC GATCATCTCG GCATCGCCAA GGTGGATATC
GTGGCGCATT CGATGGGCGG AATGCTGGCG GTGCGCATCG CACGCGCCTT TCCCGACCGG
GTCGCGCATC TCGTGCTCAC GGCGCCGATC GGGCTTGAAG ACTACCGCCT CTACGTGCCG
CCGATCGCGT CAGAGAAGAT CATGGAGACC GAGGACCGCC TCACCGCCGA AGGCTATCGC
AAGCAGTTGG AGAGCAACTA TGCGCTGAAA CTTTCGCCCG AGCAGGTCAC GCCCTTCATC
GACGCCCGCT TCAACCTCAA GGGCAGCGCC GACTATCCGC GCTGGCTGAA GAGCTTTGTC
AGCTCCTATC AGATGATCTA CCGCGAGCCC GTCGTGCACG AGATCCCGCT GATCGGACAG
CCGACTCTTT TCATCATGGG GGCCGACGAT CACAACGCGC CGGGTCGGCC GAACGCGCCG
GAAAATCTGC GCGCCCAGAT GGGCCAGAAC GCCGAATTGG CGAAGAGCCT GGCGGGCCGG
ATGCGCGATG CACGCGCCGA GGTGATCGCC AATGCAGGCC ACCTCGTGTT TCTGGATGCG
TCGGACAAAT ACGATACGCT GCTCAAGGAC TTCCTGAGCC GATAG
 
Protein sequence
MSRFAVALCA ALLAFLPAIA PAAEGPREPY GINLEGFPYP FPVNLLPLVN DGEQLRMAYM 
DVAPAQPNGR TALLLHGRNF PSSYWAPVIK TLTEQGFRVV VPDQVGFGKS TKPSGELHFD
TLARNTVALL DHLGIAKVDI VAHSMGGMLA VRIARAFPDR VAHLVLTAPI GLEDYRLYVP
PIASEKIMET EDRLTAEGYR KQLESNYALK LSPEQVTPFI DARFNLKGSA DYPRWLKSFV
SSYQMIYREP VVHEIPLIGQ PTLFIMGADD HNAPGRPNAP ENLRAQMGQN AELAKSLAGR
MRDARAEVIA NAGHLVFLDA SDKYDTLLKD FLSR