Gene BBta_5014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5014 
Symbol 
ID5149080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5245940 
End bp5246584 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID640559794 
Producthypothetical protein 
Protein accessionYP_001240923 
Protein GI148256338 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.44242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAACC TGCCGCCGGC CGATAGCGTG CTGCATCTGT TGTCGTGGCT GGCGCTGGCC 
GCACAGGCGA TGACGGCGGC GCTGGCGGCC GGTCGTCGCA GCATGGACTG GATGGGCGTC
TGCCTGCTCG GCGCGATCAC TGCGCTCGGC GGCGGCACCT TGCGCGACGT ATTACTGGGA
CATTATCCGC TCGCCTGGGT CGAGCGGCCG TCGTTGCTGC TGCTGACCGT GTTGGCCCCC
TTTGTCACCA TCGCAATGGC GCGTCTGGTG CATCGGCTGA CGATGGCCTT CCTTGTCCTC
GACGCGATCG GCCTGGTCGT CTTCACCATT GCCGGCTGCG ACATCGCCTG GCAGATGAAC
GTACCGATCG GCATCGTCAT CGTCGCCGGC ATGATCACGG GCTGCGCGGG CGGGGTGCTG
CGCGACATCC TGTGCAACGA CGTGCCGCTG CTGTTTCGCG CGGAGCTCTA TGCCAGCGTG
TCGTTGCTGA CGGGCCTGCT TTACGCGGGC GGGCTCTCCC TCGGACTCGC AGGCGGCATC
CTGACGGCGC TGAGCTTTGC GTTCGGGCTG GCGTTTCGGT TGCTCGCGAT CCGTTACAAA
TGGAACATGC CGCGCTTCGT CTTCACCGGC GAGGAGCAGC GCTGA
 
Protein sequence
MWNLPPADSV LHLLSWLALA AQAMTAALAA GRRSMDWMGV CLLGAITALG GGTLRDVLLG 
HYPLAWVERP SLLLLTVLAP FVTIAMARLV HRLTMAFLVL DAIGLVVFTI AGCDIAWQMN
VPIGIVIVAG MITGCAGGVL RDILCNDVPL LFRAELYASV SLLTGLLYAG GLSLGLAGGI
LTALSFAFGL AFRLLAIRYK WNMPRFVFTG EEQR