Gene BBta_5006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5006 
Symbol 
ID5150242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5236003 
End bp5237151 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content65% 
IMG OID640559787 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001240916 
Protein GI148256331 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.815912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.11432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCATCA AAGGCAAGGC CTACATTGCC GGGATCTATG AGCATCCGAC CCGGCACGCA 
CCCGACAAAT CGACCGCGCA GCTGCATGCC GAAGTGGCCA AGGGCGCGCT CGAGGATGCC
GGGCTCAGCG CCAAGGATGT CGACGGCTAT TTCTGCGCCG GCGATGCGCC GGGCGGCGCC
TGGCCGATGG TCGATTATCT GGGCCTGAAG GTTCGGCACA TCGATTCCAC CGAGACCGGC
GGCTGCTCCT ATCTCATTCA CGTCGGGCAC GCGGCCGAAG CGATCGCAGC CGGCAAATGC
TCGATTGCGC TGATCACGCT CGCCGGCAAG CCGCGCACCG GGCCGATGCC GCCGCGCGCC
GCCGGCGCTG AGGCCGATTT CGAGCTGGCC TATGGCGCCA CCACGCACAA CGCCTATGGC
ATGTGTGCGA TGCGCCACAT GCACGATTAC GGCACCACCT CGGAGCAACT CGCCTGGATC
AAGGTCGCTG CCTCGCATCA CGCGCAGTAC AATCCGCATG CCATGCTCAA GGAGGTTGTC
ACGGTCGAGG ACGTCCTCAA CTCGCCGATG ATCTCCGATC CCCTGCATCG CATGGATTGC
TGCGTCGTCA CCGATGGCGG CGGCGCGCTG ATCGTGACCA CGCCCGACAT CGCCAAGAGC
CTGAAGAAGC CGCTGGTGCG GCTGATCGGC CATGGCGAGG CGATGAAGGG GCCGCGCGGC
GGCAAGGATC TCGATCTGAC CTATTCGGCC GGCGTCTGGT CCGGCCCGCG CGCCTTCGCG
GAGGCGGGCG TGACGCCCAA GGATATCAAA TACGCCTCGA TCTATGACAG CTTCACCATC
ACGGTCTTGA TGCAGCTCGA GGATCTCGGA TTCTGCAAGA AAGGCGAGGG CGGCAAGTTC
GTCGCCGACG GCAACCTCAT CTCCGGCGTC GGCAAGCTGC CGTTCAACAC CGATGGCGGC
GGGCTCTGCA GCAACCATCC GGTCAATCGC GGCGGCATGA CCAAGGTGAT CGAGGCCGTG
CGCCAATTGC GCGGCGAAGC CCATCCGAAG GTCCAGGTGC AAAACTGCGA CCTCGCCATT
GCCCACGGCA CCGGTGGCCT GCTCGGCGTG CGCCACGCCG CCTCGACCTG CATTCTGGAG
CGCGTGTGA
 
Protein sequence
MTIKGKAYIA GIYEHPTRHA PDKSTAQLHA EVAKGALEDA GLSAKDVDGY FCAGDAPGGA 
WPMVDYLGLK VRHIDSTETG GCSYLIHVGH AAEAIAAGKC SIALITLAGK PRTGPMPPRA
AGAEADFELA YGATTHNAYG MCAMRHMHDY GTTSEQLAWI KVAASHHAQY NPHAMLKEVV
TVEDVLNSPM ISDPLHRMDC CVVTDGGGAL IVTTPDIAKS LKKPLVRLIG HGEAMKGPRG
GKDLDLTYSA GVWSGPRAFA EAGVTPKDIK YASIYDSFTI TVLMQLEDLG FCKKGEGGKF
VADGNLISGV GKLPFNTDGG GLCSNHPVNR GGMTKVIEAV RQLRGEAHPK VQVQNCDLAI
AHGTGGLLGV RHAASTCILE RV