Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4888 |
Symbol | |
ID | 5150315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5128227 |
End bp | 5129225 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640559685 |
Product | putative ABC transporter (substrate-binding protein) |
Protein accession | YP_001240816 |
Protein GI | 148256231 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.962716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.144986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTGA AATGGCTTGC AAGCGCCGCG CTGCTGCTGA GCGTGGTCGC GTCGACTCCT TCTTACGCCG AGGGACGGAT TCGAATCGTC GAGCAGTTCG GCACCGTCTA TCTGCCGCTG CACGTGCTGC GCGACCAGAA GCTGATCGAG AAGCATGGCC AGAAGGCCGG CCTCGAGATC AAGGTCGAAT GGACCAAGCT GAGCGGCGGC GCCGCCATCA ATGACGCCCT CATCTCCGGT GCCGTCGACA TCGGCGCAGC CGGCGCAGGC CCCGTGCTTG TGCTGTGGGA CCGCACCCGC GGATCGGCCG ACGTCAAGAT CATCGCCGCA CTCGGCGAGC AGCCGAACTA CCTCATCACC AGCAATCCCA ATGTCAAGAC GTTGAAGGAC TTCACCAAGA CCGACAAGAT CGCGGTGCCG GCGGTGGTCG TATCGCAGCA GTCGCGCCTG CTGCAGATCG CGGCGGAAAA GGAGTTCGGT GAGAGAAAAT TCAACGCGCT CGACGATCTC ACCGTCAACC TGCCGCATCC CGATGCGACG GCCGCCCTGC TGTCGGGGTC GTCGACCATC ACCGCGCATT TCTCCAATCC GCCCTATCAG GAGCAGGCGC TGCAGGATCC GAAGATCCAC AAGGTGCTGA GCTCCTACGA CATCATGGGC GGCCGCATCA CGCCGACGCT GCTCTATGCC ACCTCGAAGT TTCGCAACGA GAATCCGCGG ACGTTCAAGG TGTTCTACGA CGCGCTGAAC GAGGCCTCAC ATTGGATCGA GAGCCACAAG GCGGAGGCCG CCGAGACCTA TATCCGCATC GAGCAGTCCA AGCTCGACCC GGCCTTCGTC AAATCGGTCA TCGATAGCCC CGAGGTCAGC TTCACGACGG TCCCTAAAGG CACGTTCAAA TACGCCGCGT TCCTCGCCAA GATCGGCGCC ATCAAGACCA GGCCCGCGAG CTGGAAGGAC TACACGTTCG AAGAGCTGCA CGACAAGCAG GGCGACTGA
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Protein sequence | MIVKWLASAA LLLSVVASTP SYAEGRIRIV EQFGTVYLPL HVLRDQKLIE KHGQKAGLEI KVEWTKLSGG AAINDALISG AVDIGAAGAG PVLVLWDRTR GSADVKIIAA LGEQPNYLIT SNPNVKTLKD FTKTDKIAVP AVVVSQQSRL LQIAAEKEFG ERKFNALDDL TVNLPHPDAT AALLSGSSTI TAHFSNPPYQ EQALQDPKIH KVLSSYDIMG GRITPTLLYA TSKFRNENPR TFKVFYDALN EASHWIESHK AEAAETYIRI EQSKLDPAFV KSVIDSPEVS FTTVPKGTFK YAAFLAKIGA IKTRPASWKD YTFEELHDKQ GD
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