| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4880 |
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| Symbol | |
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| ID | 5152824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5120173 |
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| End bp | 5121618 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559677 |
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| Product | putative ABC transporter, substrate-binding protein |
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| Protein accession | YP_001240808 |
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| Protein GI | 148256223 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0732129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG CCGATCTCAG CAAGGACCGA CGCATGACGC TTCATCGATA CGCCGCACTT
TCTGCCGTCG TTCTGGCGAT GACGCTCGGA ACCGCGAAGG CCGAAACCAT CCGCGTCGCG
ATCGGTACGC AGGACACCAC CATCAATTGC GCGACCGGCG GGCTCCTGAT CCGGGAGTTG
AATCTGCTCG ACAAATATCT GCCGCATGAT GGCAAGTACA AGGATACGAC CTATGACATC
CAGTGGCGCA ACTTCACGTC CGGCGCGCCG CTGACCAACG AGATGGTGGC CGGCAAGCTC
GATTTCGGCG CCATGGCCGA CTTTCCGGGC TCGCTGAACG GCGTGGCGTT CCAGAAGGCG
GGTCGCCGCA GCCTGTTCAT CTCGGTGCTG TCGGGCAGCA CCAAGGGCAG CGGCAACGGC
ATCGTGGTGC CCAAGGACTC GCCCGCGCGT TCGCTCGACG ATCTCAAGGG CAAGACCATC
TCGGTGCCGT TTGCATCGAC GGCGCACGGC ATGCTGTTGC GCGCCATCGA GGCCAAGGGC
TGGAATCCGG ACACCGATGT CAGCATCATC ACCCAGGCGC CGGAGGTCGC AGGCCCCGCG
CTGCAGGCCA ACAAGGTCGA TGCCCATGCC GACTTCGTTC CGTTCGCCGA GCTGTTTCCC
TGGCGCGGCT TCGCGCGCAA GATCTTCGAC GGTTCGCAAG CGAGCACACC GACCTTTCAC
GGCGCGCTGG TCGACGGCGA TTACGCCGAC AAATATCCGG AAGTCGTGAC AGCCTATCTG
CGGGCCGCGC TGGAGGCCGA CCGGCTGATC GCCTCCGAGC CGGAGCGCTA CAGCGAGCTG
ATCTCGAAGG TGACAGGGAT CGAGGCCGAG GTGGTGTATC TGTTCCACGG CCCGCTCGGG
CTGCAGACCC GCGACGCCAC CTGGAAGCCG GAATTCCGGC AGGCGGTGGC GACGTCGATC
AAGACGCTGA AATATCTCAA GCGGGCCGAC AGCGATCTCG ACATCGACAA GTTCGTGACC
GACAAGTTCG TCAGGGCAGC GCTGACCCAG GCTGGCCGCG ACTACGACGC GGAGAAGACC
AACTACGCGC AGTTGCCGCT GAAGGCCAAG GATGCGGCAT CGGGCGCCGA GATCACCGAT
GTCAGCCGCG TCGCGCAGAT CTGGCTGAAG GATGAGCCGC AGGTTCGTCA TTACGCGTCC
CCGGAGGCGG CGTTGAAGGC GCTGGCGGCG CTGGAGAAGG ATGGCAGGAC CGCCCGGGTC
GTCTATGCGC AAGATCGCGA GAGCGGCATC AAGCTGTTCG CGAGCCAGGC CTGGTTCGTG
CGCAGCTCGT CGGGCGAGCT CAGTGCGTTC CTGCTGAAGG AGGGCGCCGA GCGCTGGGCC
AAGGCGAAGG GCGGCGACGT CGTCGATTTC GCCGCGGCGC GCGACGCGCT GGTCGCCAGC
CGGTAA
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| Protein sequence | MPLADLSKDR RMTLHRYAAL SAVVLAMTLG TAKAETIRVA IGTQDTTINC ATGGLLIREL
NLLDKYLPHD GKYKDTTYDI QWRNFTSGAP LTNEMVAGKL DFGAMADFPG SLNGVAFQKA
GRRSLFISVL SGSTKGSGNG IVVPKDSPAR SLDDLKGKTI SVPFASTAHG MLLRAIEAKG
WNPDTDVSII TQAPEVAGPA LQANKVDAHA DFVPFAELFP WRGFARKIFD GSQASTPTFH
GALVDGDYAD KYPEVVTAYL RAALEADRLI ASEPERYSEL ISKVTGIEAE VVYLFHGPLG
LQTRDATWKP EFRQAVATSI KTLKYLKRAD SDLDIDKFVT DKFVRAALTQ AGRDYDAEKT
NYAQLPLKAK DAASGAEITD VSRVAQIWLK DEPQVRHYAS PEAALKALAA LEKDGRTARV
VYAQDRESGI KLFASQAWFV RSSSGELSAF LLKEGAERWA KAKGGDVVDF AAARDALVAS
R
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