Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4877 |
Symbol | |
ID | 5152778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5116869 |
End bp | 5118551 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640559674 |
Product | putative ABC transporter, substrate binding protein |
Protein accession | YP_001240805 |
Protein GI | 148256220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.674427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0830201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCACCGAA CGATCAGCCC GTTAGTCTTG TGGTCCGCGT TCGATCGCGC CAACTCACTC TCTCGAGCAA AACCTCCCAT GACTGTCTCC GACCGTTTCA ACCCGCGCGC CAGCCGGCGC GAGGTACTGA CCGCATCTCT TACCCTCGCC GCAGCTCAGC TGTTTCCCGG TCGCGCCGTC GCGGAGGCCA GGCGCGGTGG CATCCTGACC ATCGCCACCC AGGCGGAGCC GCGGACATTG GTGCCCCTGC TCGACACCAA CACGCTGACC CGCAACATCA GCACCAAGGT CACCGAGGGG CTGCTGACCT TCGACGCGCA GTTCAATCCG AAGCCGCTGC TGGCGACGGA ATGGACGGTG TCTCCGGACG GGCTGGACTA TGCCTTCAAG CTGCGGCCGA ACGTCAAATG GCACGATGGC ACCAGCTTCA CCTCCGAGGA CGTCAAATTC TCACTGCTCG CATTGAAGAA GGTCGGGCCG CGCGGACGCA TCAGCTTTGC CAACATCGCC GACATCGAGA CGCCGGATCC GCTTACGGTC CTCGTCAAGC TCGCCAAGCC GACGCCCTAC TTCCTGAAGG CCTTGACCGC GGCTGAATCG CCGATCGTGC CGAAGCACGC CTATGCTTCG GACGACCTTG CCGCCAGCCC GAACAACAAC GCGCCGATCG GCACCGGTCC CTTCATCTTC GAAGAATGGA AGCGCGGCGC CTATGTTCGC CTCAAGCGCA ATCCGTCCTA TTGGCGCGCT GACCGGCCCT ATCTCGACGG CATCGTCGTC AAGTTCATCG GCGACGCCGC GGCCGCCTCG GCGGCGCTGG AGACCGGCGA GATCGACATC GACGCCAACG TGGCATTTTC CGACCTGGAG CGCCTGGGCG GCATCAAGAC GCTACAGATC TCGTCACGGC GCGACGGCTA TCTCAACAAC GCTTCCGTCC TGGAGTTCAA TCTCGAGCAC ACCGAGCTGG CCAAGACGCC CGTTCGCCAC GCGATCGCCC ATGCCATCGA CCGCAACTTC ATCCGCGACT CGATCTATTA CGGCCACGCC GACCATATCC GTTCGCCGAT CCCCGAGATC TTCCAGGCCT ATCACGATCC CGCAGGCTTC AACTATCCGA CCGATATCGC CAGAGCGAAC CGGCTGCTCG ACGAGGCCGG CGTCACGCGT GGGCGTGACG GCACGCGCTT TTCCGTCCGG CTCACCTTCA TTCCCGGCCC CGCCTTCAAG ACTACGGCGG ACTATCTGCG CTCGGCGTTG AGCCAGATCG GCATCAAGGT CACGGTGCTC GAGGGGGATC TCGCGACCTT CATCAAGCGG GTCTATTACG AGCATCAGTT CGACCTCAAC ATCAACGGCC TCGGCCTCTT GTTTGATCCG ACCGTCGGCG TGCAGCGGAT CTACTGGTCG GACGGGATCA AGAATCCCCT GCCCTATGTC AACGCCGCCC ACTACAACAA TCCGGCGGTC GACGATCTCT TCCGCCAGGC GAGCACCGAA GCCGACGAAA GCAAGCGCGC CCAGCAGTTC CGCGCCTTCC AGACAATCGC GAGCGAGGAC TTGCCCGCCC TGCCGCTGGT ATCGCTGCGG ACGGTCATCG TCTCCAGCAA TCGGGTGAAG GACATCTACA ACAGCGTCGA CCTGACCGCC GGAGACTTCT CCGATACCTG GCTCGATCGC TGA
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Protein sequence | MHRTISPLVL WSAFDRANSL SRAKPPMTVS DRFNPRASRR EVLTASLTLA AAQLFPGRAV AEARRGGILT IATQAEPRTL VPLLDTNTLT RNISTKVTEG LLTFDAQFNP KPLLATEWTV SPDGLDYAFK LRPNVKWHDG TSFTSEDVKF SLLALKKVGP RGRISFANIA DIETPDPLTV LVKLAKPTPY FLKALTAAES PIVPKHAYAS DDLAASPNNN APIGTGPFIF EEWKRGAYVR LKRNPSYWRA DRPYLDGIVV KFIGDAAAAS AALETGEIDI DANVAFSDLE RLGGIKTLQI SSRRDGYLNN ASVLEFNLEH TELAKTPVRH AIAHAIDRNF IRDSIYYGHA DHIRSPIPEI FQAYHDPAGF NYPTDIARAN RLLDEAGVTR GRDGTRFSVR LTFIPGPAFK TTADYLRSAL SQIGIKVTVL EGDLATFIKR VYYEHQFDLN INGLGLLFDP TVGVQRIYWS DGIKNPLPYV NAAHYNNPAV DDLFRQASTE ADESKRAQQF RAFQTIASED LPALPLVSLR TVIVSSNRVK DIYNSVDLTA GDFSDTWLDR
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