| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4859 |
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| Symbol | |
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| ID | 5154537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5101740 |
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| End bp | 5103338 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559657 |
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| Product | putative ABC transporter, substrate-binding protein |
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| Protein accession | YP_001240788 |
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| Protein GI | 148256203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.176928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.590645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTCA CGCGTCGCAA TCTCAGCAAG ACCCTTCTAT TCGGAACGAT CACTGCCGCC
GCCGGCCATG CGCGCACGTC GCAGGCCGCA GAGCCGCGGC GTGGCGGAAC GCTCAACCTG
GTCATTCAGC CCGAACCCCC GATTCTGGTG AGCCTCACTC ATACCGCAGG GCCGACGACG
CGGGTCAGCC CGAAGATCAC GGAAGGTCTT CTCACCTTTG ATCTCGACTT CAGGCCGCGG
CCGCAACTGG CGACGGACTG GCAAGTCAGC GACGACGGCC TGCGCTACAC CTTTGCTCTG
CGGCGCGGCG TGAAGTGGCA TGACGGCCGG GATTTCACCT CGGCCGACGT CGCCTACTCC
ATCAGCCTGC TCAAGCAGCA TCACCCGCGC GGCCGCGGCA CGCTGTCGTC CGTCCGCGAG
GTCGAGACAC CCGATGCGCA CACCGCCACA ATCGCGCTGG ACAAGCCGGC GCCCTATCTG
CTCGCCGCGT TGACGGCCTC GGAATCGCCG ATCGTGCCGC GCCATGTCTA TGAGGGCAGC
GATCCCCTGA ACAATCCGAA CGGGCGTGCG CCGATCGGTA CCGGTCCGTT CGTGTTCAAG
GAGTGGCAGC AGGGCAGCCA CATCATTCTC GAGCGCAATC CGACTTATTG GGACCCGGGC
AAGCCCTATC TCGACCGTAT CGTCGTCCGC TTCATCGCCG ATGCCAATGC ACGCGCCGTC
GCGCTGGAGA CCGGTGAGAT CCATCTGGCG CCCGACACGC CGGTTCCGCT CGGACAGATC
GAAGCGCTGA AGTCCAACCC GGCGCTGCTG ATCGAGACCC GCGGCTACGA TTACCAGCCG
ATCGTCTACC GCCTCGAATT CAATCTCGCC AATCCATACT TCGCCAAGCG CGAGGTGCGC
GCCGCCGTCG CCCACGCGAT CGATCGCGAC GCGATCACCC GCGTCGTGTT CTATGGCTGG
GGCCGGAATG CGCCGAGCGC AATCAGCCCT GCCCTGAAGC AGTTCCACAA CCCCGACATT
CCCCGCCACG ATTTCGATCC GAAGAAGGCC GAGGCGCTGC TCGATGCCGC CGGCTATCCA
CGCGGTCCAG ACGGCATCCG CTTCAAGGTG TTCCACGACT ACATGCCCTA CAGCGAGGCC
TACCAGCAGC TCGGCGCCTA CACGCGCCAG GCGCTCGCCA ATATCGGCAT TGGCGTGACC
TTGCGGGCGC AGGACGTCCC GACCTGGTTC AAACGGACCT ACACCAACCG CGATTTCGAT
TTCATGAGCA ACGGCATGAG CAACTCGTTC GATCCGACGG TCGGGGTGCA GCGGCTGTAT
TGGTCGAAGA ACTTCAAGCC CGGCGTGCCA TTCTCCAACG GCTCGGGCTA CAGCAATCCG
GAGGTCGACC GGCTGCTCGA AGCGGCCGCA GTCGAGAGCG ATCCGGCCAG GCGACGCGAA
CTGTTCAAGG CCTTCCAGGT CATCGTCGCC ACCGACCTGC CCGACGTCAA TCTCGTCACC
GGCGCCAACC TGACCATCGC CAATCGCAAG GTGCGCGACC ACACCACCAC GATCGACGGC
CCATCGGCGA ACTTCGCCGA TGTCTGGCTC GAGGCATAG
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| Protein sequence | MLLTRRNLSK TLLFGTITAA AGHARTSQAA EPRRGGTLNL VIQPEPPILV SLTHTAGPTT
RVSPKITEGL LTFDLDFRPR PQLATDWQVS DDGLRYTFAL RRGVKWHDGR DFTSADVAYS
ISLLKQHHPR GRGTLSSVRE VETPDAHTAT IALDKPAPYL LAALTASESP IVPRHVYEGS
DPLNNPNGRA PIGTGPFVFK EWQQGSHIIL ERNPTYWDPG KPYLDRIVVR FIADANARAV
ALETGEIHLA PDTPVPLGQI EALKSNPALL IETRGYDYQP IVYRLEFNLA NPYFAKREVR
AAVAHAIDRD AITRVVFYGW GRNAPSAISP ALKQFHNPDI PRHDFDPKKA EALLDAAGYP
RGPDGIRFKV FHDYMPYSEA YQQLGAYTRQ ALANIGIGVT LRAQDVPTWF KRTYTNRDFD
FMSNGMSNSF DPTVGVQRLY WSKNFKPGVP FSNGSGYSNP EVDRLLEAAA VESDPARRRE
LFKAFQVIVA TDLPDVNLVT GANLTIANRK VRDHTTTIDG PSANFADVWL EA
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