Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4858 |
Symbol | |
ID | 5154914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5099850 |
End bp | 5101445 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640559656 |
Product | putative ABC transporter, substrate-binding protein |
Protein accession | YP_001240787 |
Protein GI | 148256202 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.185299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.554017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCG ATCGCCGCGA CTTTCACTTT GGCATGCTCG CGTCGGCTGC GGCGTTGCTG CTCCCGCAGC ATGGCCAGGC CGCCGCCGAC AAGCCAGTTT CGGGCGGAAC GCTCAATTGG GTCTACTACC CCGATCCATC GGCCTTGATC GCGATCAACA CCTCGTCGGG CACCGGCCAG ACGATCGGCA CCAAGGTCAA CGAAGGCCTG CTCGCCTACG ACTATGATCT CAATCCGAAG CCGGTGCTCG CGACGTCCTG GTCGATCAGC GAGGACGGCA AGCGCTATAC GTTCAAGCTG CGGCCGAACG TGAAATGGTC GGATGGTCAG CCGTTCACCT CGGTCGACGT GGCGTTCTCG GTCGAACGCC TCAAGATCGC CCATCCGCGC GGCCGCATCA CTTTCGCCAA TGTCGAGGCA GTCGAGACGC CGGATCCGCT GACGGCCGTC ATCGTGCTGG CGAAGCCCGC ACCGTTCCTG ATTTCGGCGC TGGCCGGCGC GGAGTCGCCG ATCGTGCCGC GGCACGTCTA CTCGACGTTT AAGCCGGACG AACAGCCGAA GCTGGAGCAG ATGATCGGCA CCGGCCCCTT TATTCTCCAC GAATGGGTGC CGGGCAGCCA TCTGCTGTTC GTCCGCAATC CCAACTACTG GGATGCACCG AAGCCCTATG TCGATCGCCT AGTGCTGAAG GTCGTGCTCG ACCCGGCCGC GCGTGCCGCG GCGCTGGAGG CCGGGGAGGT CGATATCGGT GCGACGCCGG TTCCCTATGG CGACATCGAG AGGTTCAAGG CCGACAAGAG GTTTGTCGTC GATACGACCA CCTATGCCTA TTCCGGACCG CAGCAGCAGC TGTTCTTCAA TTTCGATACG CCGGCGCTGC AGGACCGGCG CGTCCGCAAG GCCATCGCGC ATGCGATCGA CCTGAAGGCG CTGCTCGACG TTGTCTATTT CGGCTATGGT CTGGTCTCGC CGTCGCCGAT CAGTACGGCG CTGCCGAAAT TCTACGATCC CAAGATCCAG GGATGGCCCG TCGACCTCAA GGCGGCGGAG CGTCTGTTGG ACGAGGCGGG CCTGCCGCGC GGCGCCGGCG GCATTCGCAC CAAGCTCCGG CTGACGCAGA ATCCGTTCCT GCCGCCGAGC TTCGCCGATT TTCTTCGCAA CGCGTTGCGG CGCATTGGAC TCGATATCGA GATCCAGCGT TTCGACCTCG CGACCTATCT CAACGTCGTC TATCGCGACC GTGCGTTCGA TCTGACGATC GAGAGCCTGT CGAACACGTT CGATCCGACG CTTGGCGTGC AGCGGGCTTA TTGGTCGAAG AACTTCCGGA TCGGCCTGCC ATTCTCCAAC GCCGCGCATT ACAGCAATCC GGAGATCGAC CGGCTGCTGG AGGCCGCGGC GATCGAGACG GATGTCGAGA AGCGCCGTCA GCTGTGGTCG TCATTCCAGT CCATCATCCA TGAGGACGTG GCGTCGGTCG ATCTGGTCGC TGCCGGCGGC GTCATCATCG CCAACCGCAA GGTGCGCAAT TTCGCGCCCG GTGCTGAGGG GCTGAATGGG AGCTTCGCCG ATCTCTGGAT CGACCCCTCG GCCTGA
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Protein sequence | MKLDRRDFHF GMLASAAALL LPQHGQAAAD KPVSGGTLNW VYYPDPSALI AINTSSGTGQ TIGTKVNEGL LAYDYDLNPK PVLATSWSIS EDGKRYTFKL RPNVKWSDGQ PFTSVDVAFS VERLKIAHPR GRITFANVEA VETPDPLTAV IVLAKPAPFL ISALAGAESP IVPRHVYSTF KPDEQPKLEQ MIGTGPFILH EWVPGSHLLF VRNPNYWDAP KPYVDRLVLK VVLDPAARAA ALEAGEVDIG ATPVPYGDIE RFKADKRFVV DTTTYAYSGP QQQLFFNFDT PALQDRRVRK AIAHAIDLKA LLDVVYFGYG LVSPSPISTA LPKFYDPKIQ GWPVDLKAAE RLLDEAGLPR GAGGIRTKLR LTQNPFLPPS FADFLRNALR RIGLDIEIQR FDLATYLNVV YRDRAFDLTI ESLSNTFDPT LGVQRAYWSK NFRIGLPFSN AAHYSNPEID RLLEAAAIET DVEKRRQLWS SFQSIIHEDV ASVDLVAAGG VIIANRKVRN FAPGAEGLNG SFADLWIDPS A
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