| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4832 |
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| Symbol | |
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| ID | 5154901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5071690 |
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| End bp | 5073345 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640559631 |
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| Product | putative ABC transporter (substrate binding protein) |
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| Protein accession | YP_001240762 |
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| Protein GI | 148256177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.264059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.92248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA AGATGAACTC GCGCTTTGCT TTGCTCACGC GCTCACGGCG CCGTGTGCTG
ATGAGCGGAT TTGCCGCGGC CCTGGTCGCG ATGACGGCGC TGCCGGCGGC CTGCGAGGCC
GGCGCGCCGA AAAATGGTGG CGACATCGTC TTCCTCATCG ACTCCTTGGG GGGCACCTGG
ATCCCGAACA ACAGCGCGAT CTCGAGCTTC CAGGGCCACA TCTGGGGCCA TGTGACCGAC
AAGCTCGTCT ATGTCGATGC CGACGGCAAG GTCAGCCCCT GGATCGCCGA GCGCTGGGAG
CAGAACGAGG ACGCGACCTC GTTCATCCTG CATTTGAAGA AAGGCGTGAC CTTTTCCGAT
GGCACGCCGC TCGACGCCGC CGCCGTGGTC GCCAATCTCG ACATCTGGTA CGCCGGACGC
AAGAGCGAGG GCATCAACCC GATCGGCCTG TTTCCGAAGA CCTACAAGAG CGCCGAGGCG
ATCGACGCAA GCACGGTCAA GGTCTCCTTC AAGGCGCCGA CGCTGGGCTT CATTCCGACG
CTCGGCTATC ACGGCTCGAT CCTGATCTCG CCGAAGACGC TCGCACAACC GGCGAGCCAG
CAGGCCGATC TCGGCAAGAC CTCCGGCAGC GGTCCCTACG TGGTCGAGTC CTGGAAGGAA
GGCGACTTCG TCAAGCTGGT GAAGCGCAAG GACTACAATT GGGGGCCCGC GGCGGTTGGA
CACACCGGCC CGGCCTTCCT CGAGTCGATC ACCTACAAGA TCGTCTCCGA GCCGTCGCTG
CGGGTGGCCG CCGTTCAGTC CGGGCAGGCC GACGTCGCCT ACAATGCCTC GCCACAGGAG
CTGAAATCGC TGAAGCAGGC CGGCTTCACC ATCGCGACGC CGCGTTATCT CGGCTTCGTC
AATGGCTGGG CGATCAACAC CAGGCTGGAG CCCTACAACG ACGTGAAGGT GCGCCAGGCG
CTGCAGGCGT CGATCAACCG CCAGGAGATC ATCGATACCG TCTATACGCC AGAATGGAAA
CTCGCCACAT CGTTCATCCA GAGCAACGTC CCCGGCGCGA CCGACCAGAG TGCGCTGCTG
GCCTACAATC CTGACAAGGC CCGGAAGCTG CTCGACGAAG CCGGCTGGAT CAAGGGCGCC
AATGGCGTTC GCAGCAAGGA CGGCAAGCCG CTCACCTTGA CACTCTACTC CAATCCCTAT
CTCGCAACCG CCAAGGCGGT CGACGAGCTC ATCGCCCAGC AGCTCGGCAA GATCGGCTGG
AAGGTCTTCA TCCGCGCCTA TGACGTCGTG ACCTTCGGCG AGAAGGTGCA GTTCGGCGGC
CCGGCTGTGC CGGCCTATGA GGTGACGCGC AGCTTCATCG ACGCCGGCAC GGTCGCCAGC
ATCCTGACCA ATGCCAACAA TGGCGAGAAC TGGTTCGCGC TCGGCGACAG CGACGGCAAG
CTCAACGATC TGCGCGACAG GATCGCCGGC GCCGGCACCA CCGAGATCCG CGCTCCGCTG
CTCGACGAGC TGCAGCGCTA TGTGCTCGAG CAGGGCTATT TCATCCCGCG CACCCAGATC
GTCCAGCGCA TCTACGTGCA GTCGCCGCGG CTCAAGGGCG AGGTCTACAA CGGCATCGCC
TATGCCAGCT ACTACACGGC GACCAAGGGC GAGTAG
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| Protein sequence | MADKMNSRFA LLTRSRRRVL MSGFAAALVA MTALPAACEA GAPKNGGDIV FLIDSLGGTW
IPNNSAISSF QGHIWGHVTD KLVYVDADGK VSPWIAERWE QNEDATSFIL HLKKGVTFSD
GTPLDAAAVV ANLDIWYAGR KSEGINPIGL FPKTYKSAEA IDASTVKVSF KAPTLGFIPT
LGYHGSILIS PKTLAQPASQ QADLGKTSGS GPYVVESWKE GDFVKLVKRK DYNWGPAAVG
HTGPAFLESI TYKIVSEPSL RVAAVQSGQA DVAYNASPQE LKSLKQAGFT IATPRYLGFV
NGWAINTRLE PYNDVKVRQA LQASINRQEI IDTVYTPEWK LATSFIQSNV PGATDQSALL
AYNPDKARKL LDEAGWIKGA NGVRSKDGKP LTLTLYSNPY LATAKAVDEL IAQQLGKIGW
KVFIRAYDVV TFGEKVQFGG PAVPAYEVTR SFIDAGTVAS ILTNANNGEN WFALGDSDGK
LNDLRDRIAG AGTTEIRAPL LDELQRYVLE QGYFIPRTQI VQRIYVQSPR LKGEVYNGIA
YASYYTATKG E
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