Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4716 |
Symbol | |
ID | 5152785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4942188 |
End bp | 4943078 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640559518 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001240649 |
Protein GI | 148256064 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACTAA GCGACCTGCA GACTTTCGCG GCCGTCGCGC GCACGGGCGG CATCACGCGC GCCGCCGAAG CTCTCAACAC GGTGCAGTCC AACGTCACGC AGCGGATCAA GGCCTTGGAG GCCGAGATCG GCACCGCATT GTTCGAACGC CACAGCCGCG GCATGACTCT CACCGGCGCC GGACTGCGCC TGTTGCCCTA TGCCGACCGG ATCGCCGCGC TATCGCGCGA AGCCCTGCTC GCCGCGCGCG ACGACGGCGA GCCGATGGGG CCGCTGCTGA TCGGCTCGAT GGAGACGACC GCGGCAGTGC GCCTGCCGAC ACGCCTTGCG GATTTTCACC GGCGCTTCCC TTCCGTGGCC TTGAGCCTGC GCACGGCGCC GACAGCGGAT CTGGTGGCTG GCGTTCTGGA CGGAACGCTC GACGGCGCAT TCGTGGCCGG CCCGATCGAG CATCCCGACC TCACCGGCGT GGTCGCCTTC GAGGAAGAAC TCGTGCTGGT GACAGCCCGG CGCTTCGAGA CGCTGGCGGC GTTGCGTGCC GCGACCGCCG CGTCGGGTCC GACCGCGCTG GTGTTCCGGG CCGGCTGCAC CTACCGGCAA CGTCTGGAGC AGGTCTTCAA CGAGTTCGGC TGGCCCGCCG CAGCCCGCAT CGAACTCGGC ACGCTCGACG GCATGATCGG CTGCGTGGCC GCCGGCATGG GCGTCGCACT GCTACCCCGC GCGGTGGTGA CGCGGCATGA GATGATCGGC AGCGTCGGCC TGCACACGCT CACGCCATCT CATGCGCGGG TCGATACGCT TTTCATCCAT CGCCGCGCGG CGCATCGCAG CAGCGCACTC TCGGCGTTCA TGGCGGGGCT GGCGGGCCGG GGTCACGACA TCGCGGCGTG A
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Protein sequence | MELSDLQTFA AVARTGGITR AAEALNTVQS NVTQRIKALE AEIGTALFER HSRGMTLTGA GLRLLPYADR IAALSREALL AARDDGEPMG PLLIGSMETT AAVRLPTRLA DFHRRFPSVA LSLRTAPTAD LVAGVLDGTL DGAFVAGPIE HPDLTGVVAF EEELVLVTAR RFETLAALRA ATAASGPTAL VFRAGCTYRQ RLEQVFNEFG WPAAARIELG TLDGMIGCVA AGMGVALLPR AVVTRHEMIG SVGLHTLTPS HARVDTLFIH RRAAHRSSAL SAFMAGLAGR GHDIAA
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