| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4510 |
|---|
| Symbol | |
|---|
| ID | 5154544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 4724686 |
|---|
| End bp | 4725837 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640559311 |
|---|
| Product | putative Zinc metalloprotease |
|---|
| Protein accession | YP_001240448 |
|---|
| Protein GI | 148255863 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.229371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.52884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGT TTTTCCACCA TATCTTCAAT ACGTTGAGCA ACGGCCTTCT CGGCTATATC
GTCCCGTTCC TGTTCGTGCT GACGATCGTG GTGTTCTTCC ACGAACTCGG CCACTTCCTG
ATCGCGCGCT GGGCGGGCGT GAAGGTGCTA ACGTTTTCGC TCGGATTTGG TCCGGAACTG
ATCGGTTTCA ACGACCGCCA CAACACCCGC TGGAAGATCT CCGCGATCCC GCTCGGCGGC
TATGTGAAGT TCTTCGGCGA CGAATCCGAG GCCTCGACAC CGTCGGCCGA GGCGCTGGCC
AAGATGACGC CGCAGGAGCG CGCCGACAGC TTCCACCACA AGACGGTCGG CCAGCGCGCC
GCGATCGTCG CGGCCGGCCC GATCGCCAAT TTCATCCTCG CCGTGATCAT CTTCGCCGGC
ATGGCGCTGT ATTTCGGCAA GCCGAACACC ACGCCGCGGG TCGACGCGGT GCAGCCGGAC
AGCGTCGCGG CGGCGGCCGG CTTCAAGAAT GGTGACGTTA TCGCCGCCAT TGACGGCCGG
CCGATTGAGA CCTTCGCCGA CATGCAGCGG GTGGTGTCGG TCAGCGCCGG CTCGGAATTG
TCGTTTCTGA TCAAGCGCGA CGGCACGGAA CTGACCCTGA AGGCCACCCC GGCGCTGAAG
GAGGTCAAGG ATCTGTTCGG CAACAGCCAC CGGATCGGTG TGCTCGGCAT TCAGTACAAT
GCCAAGCCGG ACGAATCGCG CTCGATCCCG GTCGGGTTCT TCGAATCGAT CAAGATCGGC
TTCGAGCAGG TCTGGTTCAT CATCGCGACA ACCTTCAAGT TCATCGCGTC GTTGTTCGCG
GGAGCCGGGA GTGCCGGCGA TGTCGGCGGT CCGATCCGAA TCGCACAACT CTCCGGGCAG
GCTGCGAGCC TTGGTTTCCA ATTCGTTGTG CAGCTGTGTG CGACCCTGTC GGTCTCCATC
GGCCTGTTGA ACCTGTTCCC AGTTCCTCTG CTCGATGGCG GGCACCTGCT GTTTTACGGG
GTTGAAGCGG TCCGCGGCCG TCCGCTGTCC GAGCGGGCGC AGGAAATGGG GTTCCGAATC
GGCCTGGGGC TGGTTCTGAT GCTGATGGTG TTCGCGACCT ACAACGATAT TCTGCACCTC
GCCGGGTCGT GA
|
|---|
| Protein sequence | MSEFFHHIFN TLSNGLLGYI VPFLFVLTIV VFFHELGHFL IARWAGVKVL TFSLGFGPEL
IGFNDRHNTR WKISAIPLGG YVKFFGDESE ASTPSAEALA KMTPQERADS FHHKTVGQRA
AIVAAGPIAN FILAVIIFAG MALYFGKPNT TPRVDAVQPD SVAAAAGFKN GDVIAAIDGR
PIETFADMQR VVSVSAGSEL SFLIKRDGTE LTLKATPALK EVKDLFGNSH RIGVLGIQYN
AKPDESRSIP VGFFESIKIG FEQVWFIIAT TFKFIASLFA GAGSAGDVGG PIRIAQLSGQ
AASLGFQFVV QLCATLSVSI GLLNLFPVPL LDGGHLLFYG VEAVRGRPLS ERAQEMGFRI
GLGLVLMLMV FATYNDILHL AGS
|
|---|
| |