Gene BBta_4503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4503 
Symbol 
ID5154730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4716598 
End bp4717374 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID640559304 
Productputative carboxymethylenebutenolidase 
Protein accessionYP_001240441 
Protein GI148255856 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.247167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.813173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC GGCTTCGGCT CTTCCGACGG ATCTGCGCCA CGGCGCTGAT GCTGGCCTGC 
ATCGGCGCGA GCCCAACGCA TGCAGACGAT GCAGCGCCGC AGGAACTGAC CGTCGCGACC
GCCGACGCGC CGGTCGCGAT CAAGCTGTTT CCCGGCCGTC AGGACGGCAG GCGGCCGGCC
GTGATCATTC TCCACGGCGC ACAGGGGATT GAGCGCTTTG CGGCAGCGTA TCGACGTTAT
GCCGAGACGC TGGCTCAGAA GGGGATCGAT GCGGTTCTCG TGTCCTACTA CGCCGCCGCC
GACATCGAGC CGATGGGATC ATCTGATCAG GCTTCTCGGC AAGCCTATTT TTACAAACAT
TTGCCGGAGT GGTCGGCGCG CATCCGCGAC GTCGTCTCCT TCATGGCGCG ACGTGACGTG
TTCTCCGGCA AGGTCGGGCT GCTCGGTTTC TCCAATGGCG GCTTCCTCGC CGTGACCTCT
GCCGCATCAG ATCCGCGGAT CGACGCGCTG GTGGTGTTTT ATGGCGGGAT TCCCGGCCCG
GCTCAGCATG GCCTGGCTCA CCTGCCGCCT CTGCTCGCGC TGCACGGCGA CGCCGACCGC
AACGTCCCCC TCTCGTCGGG CAAGGCGCTT GTCGATCGTG CCGCGGCACT CGGCGGTGCG
GCCGATCTGG TCGTCTATCC GGGCATGGGC CACGGCTTCG ATTTCGATCC AAGCCGCCCT
GAAGCCGCCG ACGCGCTGAC ACGAACGGTC AGTTTTCTCC AGGCGCATTT GCGGTGA
 
Protein sequence
MAKRLRLFRR ICATALMLAC IGASPTHADD AAPQELTVAT ADAPVAIKLF PGRQDGRRPA 
VIILHGAQGI ERFAAAYRRY AETLAQKGID AVLVSYYAAA DIEPMGSSDQ ASRQAYFYKH
LPEWSARIRD VVSFMARRDV FSGKVGLLGF SNGGFLAVTS AASDPRIDAL VVFYGGIPGP
AQHGLAHLPP LLALHGDADR NVPLSSGKAL VDRAAALGGA ADLVVYPGMG HGFDFDPSRP
EAADALTRTV SFLQAHLR