| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4487 |
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| Symbol | ctpA |
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| ID | 5155124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4699808 |
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| End bp | 4701142 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559291 |
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| Product | carboxy-terminal-processing protease precursor (C- terminal-processing protease) |
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| Protein accession | YP_001240428 |
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| Protein GI | 148255843 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.372365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAAGA ACTGGCTGTT CCTGGCGGGC ACGCTGACCG GTGTCGGACT GACCTTGCTG
GTCAGCGGAC CCGACGGTGC GCAACTGATC GCACGGGCCA AGGCCGCGGC CGGCATGGCC
GACACCTATT CGCAGCTCAA CCTGTTCGGC GCGGTGTTCG AGCGCGTTCG TGCCGACTAC
GTCGAAAAGC CCGATGATCC CGCCCTCATC GAGGGGGCGA TCAATGGCAT GGTGTCATCG
CTCGATCCGC ATTCGCGCTA CATGAACGAC AAGTCCTGGC GCGACATGCA GGAAACGACA
TCCGGTGAGT TCGGCGGCCT CGGTATCGAG GTCACGATGG AGGATGGGCT CGTCAAGGTG
GTCGCTCCGA TCGACGATAC GCCGGCCTCG AAGGCTGGCA TTCTCTCGGG TGACCTGATT
GCCAAGATCG ATGGCGAAGC GGTCCAGGGG CTGACGCTCG AACAGGCCGT TGCCAAGATG
AAGGGCGGCG TCAACACCAA GACCAAGCTC ACCATCATGC GCAAGGGCAA GGACGCGCCG
CTCGACGTGA CGCTGACGCG GGAGATCATC CGTGTCCGCC CGGTGCGTTA TCACACCGAG
GGCGGCGATA TCGGCTATAT CCGCATCACC TCGTTCAACG AGCAGACCAC CGAGAGCCTG
CGCAAGGCGA TCACCAGCAT CTCGAAGGAC ATTCCGCAGG ACAAGCTCGC CGGCTATGTC
GTCGACCTGC GCAACAATCC GGGCGGCCTG CTCGACCAGG CGGTGTCGGT GTCCAGCACG
TTCCTGCCGC GTGGCGAAGT GGTGTCGACG CGCGGGCGCA ATCCGGAAGA GACGCAGCGC
TTCACGGCGC GCGGCGGCGA TCTCACCAAG GGCAAGCCGC TGGTGGTTCT GATCAACGGC
GGATCGGCCT CGGCCTCGGA GATCGTCGCG GGCGCGCTGC ATGATCACAA GCGCGCGACG
CTGGTGGGCA CGCGGTCATT CGGCAAGGGC TCGGTGCAGA CGATCATTCC GCTCGGGGCC
GGCAACGGCG CGCTCGCCCT GACCACCGCG CGCTATTACA CGCCGTCGGG CCGCTCGATC
CAGGCGCAGG GCATCGCGCC CGACATCGAG GTCAAGCAGG ACGTGCCGGA TGATCTGAAG
GATCGCACCG ACATCAAGGG CGAAGCGTCG ATGCGCGGGC ATCTCTCGGC GGCCGACGGC
ACCGAGCAGA CAGGTTCGCA ATCCTACGTT CCGCCGGATG AGAAGGACGA CAAGGCGCTG
CACGCGGCCT TCAACGTGCT GCGCGGCGTC ACAGTGAATG CCGACGTTCG CGCCAAGGCA
GCGGTGCCGA ATTGA
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| Protein sequence | MRKNWLFLAG TLTGVGLTLL VSGPDGAQLI ARAKAAAGMA DTYSQLNLFG AVFERVRADY
VEKPDDPALI EGAINGMVSS LDPHSRYMND KSWRDMQETT SGEFGGLGIE VTMEDGLVKV
VAPIDDTPAS KAGILSGDLI AKIDGEAVQG LTLEQAVAKM KGGVNTKTKL TIMRKGKDAP
LDVTLTREII RVRPVRYHTE GGDIGYIRIT SFNEQTTESL RKAITSISKD IPQDKLAGYV
VDLRNNPGGL LDQAVSVSST FLPRGEVVST RGRNPEETQR FTARGGDLTK GKPLVVLING
GSASASEIVA GALHDHKRAT LVGTRSFGKG SVQTIIPLGA GNGALALTTA RYYTPSGRSI
QAQGIAPDIE VKQDVPDDLK DRTDIKGEAS MRGHLSAADG TEQTGSQSYV PPDEKDDKAL
HAAFNVLRGV TVNADVRAKA AVPN
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