Gene BBta_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4466 
Symbol 
ID5154362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4677866 
End bp4678657 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID640559271 
Producthypothetical protein 
Protein accessionYP_001240408 
Protein GI148255823 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.354651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATG CATTCACCCC TGCCAACTCG TCGAAGCCCG GTCCGAACCA GCCGGAGCTG 
AATTCGGAGG CGATCTGGCA GGCGCGCGTC AACCTCGCGG CCTGTTTTCG CATGGCGGCG
CGGTACGGCC TGGAGGAGGG CATCTGCAAC CACTTCTCGG CGCTGGTGCC CGGCTACGAT
GACCTCTTCA TCGTCAATCC CTACGGCTAC GCCTTTCGCG AGCTGACGGC ATCGCAGCTG
CTGGTGTGCG ATTTCGACGG CAACGTCATC GCCGGCGACG GCCGCCCGGA AGCCACCGCC
TTCTACATTC ATGCCCGCAT CCACAAGGCG CTGCCGCGCG CCAAGGTCGC CTTCCACACG
CACATGCCCT ATGCAACGGC GCTGTCGATG ACGGAAGGCC AGCCGCTGAT CTTTGCCGGA
CAGACCGCGT TGAAATTCTA CGGCCGCACC GCCGTCGACG AGAACTACAA CGGGTTGGCG
CTCAACAACA GCGAGGGCGA CCGCATCGCC GCCGCGATCG GCGACGCCGA CATCGTGTTC
ATGAAGCATC ATGGCGTGAT GGTGCTGGCG CCGACCATCG CGGAAGCCTG GGACGATCTG
TACTATCTCG AGCGCGCCTG CCAGGTGCAG TGCCTGGCGC TGTCGACCGG GCGGACGGTC
GTGCCGGTCG CCCCCGAGAT TGCCGAAGCG ACCTACCGGC AGATGCGGGA CGGCGATACG
GAATCGGCGC GGCTGCATCT CGAGGCGATC AAGCGCACGC TGGACGCCGA GGAGCCGGCG
TATCGGAGTT GA
 
Protein sequence
MAHAFTPANS SKPGPNQPEL NSEAIWQARV NLAACFRMAA RYGLEEGICN HFSALVPGYD 
DLFIVNPYGY AFRELTASQL LVCDFDGNVI AGDGRPEATA FYIHARIHKA LPRAKVAFHT
HMPYATALSM TEGQPLIFAG QTALKFYGRT AVDENYNGLA LNNSEGDRIA AAIGDADIVF
MKHHGVMVLA PTIAEAWDDL YYLERACQVQ CLALSTGRTV VPVAPEIAEA TYRQMRDGDT
ESARLHLEAI KRTLDAEEPA YRS