Gene BBta_4375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4375 
Symbol 
ID5152937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4590554 
End bp4591309 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID640559185 
Productputative outer-membrane protein 
Protein accessionYP_001240322 
Protein GI148255737 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.434769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0632497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGTC TGTTGCTGGG GGCGACAACT TCGCTGGCGC TGGGGATTGC GCCGGCCATC 
GCTGCCGATT TGCCCGCGCG CACCTTCACC AAAGCGCCTG CGATGATCGC GACGATCTAT
GATTGGAGCG GCTTCTATCT GGGCTTCAAT GCCGGCGGCG GATCGGCACG GACCTGCTGG
ACCAACCAGG TCACCATTGC CGGCGTCGCG GCCACCAATG CCGAGGGCTG CCATGACGCG
ACCGGCGCGC TGGCCGGCGG CCAGGTCGGC TATCGCTGGC AGACCGGCGG CTGGGTGTTC
GGCGTCGAAG GCCAGGGCAA TTGGGCGAAT CTGAAGGGCC GCAACGCGAG CCAGTTGGCG
CCCGGCGTGA CCAACCAGAC CAAGATCAAC GGTGTCGGCC TGTTGACCGG CCAGATCGGC
TACGCCTGGA ACAACGTGCT CTGGTACGTC AAAGGCGGCG CCGCCGTCAC TGGCGAGAAG
TATAGCGGGC TGGCGACCGC GACCGGGACG CCGTTCGATC AAGCCAGCGC GACCCGCTGG
GGGGCTGCCG TCGGCACCGG CGTCGAGGTC GGCTTCGCCA ATAACTGGTC GATCGCAGCC
GAGTACGAGC ATCTCTTCAT GGGCAACCGG ACCCTGACCT TCTCAGGTGT GCCCGGAGGC
GCTGCCACGC GAACCGACGC CGTCGGCCAG GATGTCGACA TGGCCACCGT CCGGGTCAAC
TATCGCTGGG GCGGCCCCGT CGTCTCCAAG CACTGA
 
Protein sequence
MRSLLLGATT SLALGIAPAI AADLPARTFT KAPAMIATIY DWSGFYLGFN AGGGSARTCW 
TNQVTIAGVA ATNAEGCHDA TGALAGGQVG YRWQTGGWVF GVEGQGNWAN LKGRNASQLA
PGVTNQTKIN GVGLLTGQIG YAWNNVLWYV KGGAAVTGEK YSGLATATGT PFDQASATRW
GAAVGTGVEV GFANNWSIAA EYEHLFMGNR TLTFSGVPGG AATRTDAVGQ DVDMATVRVN
YRWGGPVVSK H