| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4336 |
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| Symbol | |
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| ID | 5150657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4544882 |
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| End bp | 4546633 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640559151 |
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| Product | putative toxin/protease secretion system |
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| Protein accession | YP_001240288 |
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| Protein GI | 148255703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCA TCGGCGTATT CAGCGGCGTC ATCAACATCC TGATGCTGTC CGGCTCGATC
TACATGATGC AGGTCTACGA CCGGGTCATT CCGAGCAAGA ACATGGCGAC GCTCATCGGT
CTCTCGGTGA TGATTCTGTT CGTCTATATC ATCCAGGGCT ATTTCGACGC CCTGCGCACC
CGCATGCTGT GTCGGGTGGC GACCGTGTTC GACGCCAGCC TGCAGGACGC CATCCATCAC
GCCCTGGCCA CCCTGCCCTT GCGCGGGACG AAGCCGATGC TGATGCAGCA GCCGCTGCGC
GATCTCGACC AGTTGCGGGC CTTCATGTCG AGCATGGGGC CGACTGCATT CCTCGACATG
CCGTGGATTC CGATCTTTCT GATCGGCATG TTCCTGTTTC ATCCGCTGAT CGGCGTCACC
GCGATCATCG GCACCGTCGG CATCATCTCG ATGACGCTCG TGACCGAGCG GCTGTCACGG
CAGGCGAGCC GATCGGCCAG CGATACCAGC GCCGCGCGCC AGGTTCTCGC CGACGCCACC
CAGCGCAACG CCGAGGTGAT TCGCGCGCTT GGAATGATGG ATCGGTTCTC GGTACGCTGG
AACGCTATCA ACGAGCGCTA TCTGAAGGAC AATATCCGCG CGAGCGACGT CTATGCCAAT
CTCGGATCGG CAGCCAAGGT GCTGCGCTTC ATCCTGCAGT CCGGCATGCT CGGCATCGGC
GCCGCGCTCG TGGTGTCGGA CCAGGCGTCC GGCGGCGTCA TGATGGCCTC GTCCATTTTG
ATGGGCCGCG CGCTGGCGCC GGTCGAGCTC GCCCTGGGCA GCTGGAAGCA GCTCGTTGCC
GCGCGGCAAG GCATCGCCAG GCTGCGCGAC ATCTGCAAGG CGACCGCCAA GCCGGAGGCA
CCGCCCGTCG CCCTGCCGCG GCCCTATCGC GAGCTGACGG TGCAGGAATT GACCGTGGCC
GCGCCCGGCA CCGATCGCCC GATCGTCCAT AATGTGTCGT TCTCGATCAA GGCGGGCACG
GGGCTTGCGC TGCTCGGTGC CAGCGCGTCC GGCAAGACCT CGCTCTCCAA GGCACTGGTG
GGCATATGGC CTGCGCTGCA AGGCACGGTC CGGCTCGACG GTGCAGCGCT CGACCAGTGG
AGCAACGAGG ATCTCGGCCG CCATATCGGC TACCTGCCGC AGGATGTCGC GCTGTTCGAC
GGCAGCATCG CCGACAACAT CTGCCGCTTC GACGAGAATG CGAGTTCGGA TTCGATCTTG
AAGGCGGCAC AGATCGCAGG TGTCCACGAC ATCATCCTGC GGCTGCCGGA GGGCTATGCG
ACACGCATCG GCCAAGGCGG CATGTCGCTG TCGGCGGGTC AGCGCCAGCG CGTCGGACTC
GCCCGTGCGG TCTATGGTGA TCCGTTCCTC ATCGTGCTGG ACGAGCCCAA CGCCAATCTC
GACACTGACG GCGAGAATGC TCTGAGCCGC GCCATCCAGA TCATGCGGCA GCAGAATCAG
AGCATCGTGA TCGTGATCTC GCACCGCCCG AGCGCGCTGA ACGCACTCGA TATGGCGCTG
GTCCTCTACG AAGGTAAGGC GATCGCATTC GGTCCCTGCC AGGAGATCTT TGCACGCGTC
GCCGGGGCCA AGCCGCCGGC CGGACCGGCT GTCGCGCATG CCGCGGCTGC GCCAAGGGTC
GCAGCCCCTG CGCAAGCTCC GAATCCGAAC GTGAGATCGC TTCGTCGCGC CGCCCCAGCA
GAAAGCGTTT GA
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| Protein sequence | MAGIGVFSGV INILMLSGSI YMMQVYDRVI PSKNMATLIG LSVMILFVYI IQGYFDALRT
RMLCRVATVF DASLQDAIHH ALATLPLRGT KPMLMQQPLR DLDQLRAFMS SMGPTAFLDM
PWIPIFLIGM FLFHPLIGVT AIIGTVGIIS MTLVTERLSR QASRSASDTS AARQVLADAT
QRNAEVIRAL GMMDRFSVRW NAINERYLKD NIRASDVYAN LGSAAKVLRF ILQSGMLGIG
AALVVSDQAS GGVMMASSIL MGRALAPVEL ALGSWKQLVA ARQGIARLRD ICKATAKPEA
PPVALPRPYR ELTVQELTVA APGTDRPIVH NVSFSIKAGT GLALLGASAS GKTSLSKALV
GIWPALQGTV RLDGAALDQW SNEDLGRHIG YLPQDVALFD GSIADNICRF DENASSDSIL
KAAQIAGVHD IILRLPEGYA TRIGQGGMSL SAGQRQRVGL ARAVYGDPFL IVLDEPNANL
DTDGENALSR AIQIMRQQNQ SIVIVISHRP SALNALDMAL VLYEGKAIAF GPCQEIFARV
AGAKPPAGPA VAHAAAAPRV AAPAQAPNPN VRSLRRAAPA ESV
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