| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4296 |
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| Symbol | |
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| ID | 5149393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4500574 |
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| End bp | 4501629 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640559115 |
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| Product | putative branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | YP_001240252 |
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| Protein GI | 148255667 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.258747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00201809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGACGA TCTCCGAAGC CGCTCCTACA CCGGCGCGAT CCTCGCTGCT CAACGCCAAT
GTGCTCGGCA TCGTGCTGCT GCTGGTGCTC GCTTACGGCC TCGTGCCGCT GATCGGCTCC
GACTATCTGA TGGACGCGGT GCTGACGCCA TTCCTGGCAT TGGCGCTGGC CGCAGTCGGG
CTCAACGTGC TGACCGGCTA TGCCGGTCAG GTGTCGCTGG GCTCGGCGGC GTTCCTCGCG
GTCGGCGCTT ATGCTGCCTA TAATCTCAAT CTGAGGTTGC CGCAATTGCC GCTGCTCGCC
GACATCGTGT TGGCCGGCGG CATCGCCGCC GCGGTCGGAA TCATCTTCGG CCTGCCGAGC
CTGCGGCTGC GCGGCTTCTA TCTCGCGGTC TCGACGCTCG CGGCGCAGTT CTTCGTGCAG
TGGGCGCTGA CCAAGTTCGG CTGGTTCTCG AACGACAATG CGTCGGGGGT GATCGACGCG
CCCGTCATTC GCGTCGGCAG CCTGACCTTC ACGAGCGCGA CCGGACGCTA CGTGTTCTCG
TTGACGATCG TCGCGGTCGC CACCGTGCTG ACGGCGCGGC TGCTGTCGTC ACAGACGGGG
CGTAACTTCA TCGCGGTGCG CGACCACGAG ATCGCGGCCC GGGTGATCGG AGTGCCATTA
CTGCGCACCA AGCTGCTCGC CTTCGGGGTC TCGTCGTTCC TGATCGGCGT CGCCGGCGTG
CTCTGGGCGT TCGCCTATCT GCGGACGGTC GAGCCGGCCG GGTTCAACCT CGATCGCTCG
TTCCAGATCC TGTTCATCAT CATCATCGGC GGGCTGGCCT CGCTGCGCGG CGCCTTCATC
GGTGCCGCCT TCATCATCGT GTTTCCGCTG CTGCTGTCGC GACTCGGCGC CGCCGTGCTC
GGCAGCGTGT TCGATTCCGG CGTGCTGGAG ATGAGCCAGC GCATCGTCAT CGGCGCGCTG
ATCATCGCCT TCCTGATCGC CGAGCCGCGC GGCCTGATCG CGCTGGTCGA CCGTGCGGCC
AACGTGCTGC GCCGCCTCCG TTCATCCCAG ACCTGA
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| Protein sequence | MTTISEAAPT PARSSLLNAN VLGIVLLLVL AYGLVPLIGS DYLMDAVLTP FLALALAAVG
LNVLTGYAGQ VSLGSAAFLA VGAYAAYNLN LRLPQLPLLA DIVLAGGIAA AVGIIFGLPS
LRLRGFYLAV STLAAQFFVQ WALTKFGWFS NDNASGVIDA PVIRVGSLTF TSATGRYVFS
LTIVAVATVL TARLLSSQTG RNFIAVRDHE IAARVIGVPL LRTKLLAFGV SSFLIGVAGV
LWAFAYLRTV EPAGFNLDRS FQILFIIIIG GLASLRGAFI GAAFIIVFPL LLSRLGAAVL
GSVFDSGVLE MSQRIVIGAL IIAFLIAEPR GLIALVDRAA NVLRRLRSSQ T
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