| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4216 |
|---|
| Symbol | accC |
|---|
| ID | 5150252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4429013 |
|---|
| End bp | 4430362 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640559041 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_001240178 |
|---|
| Protein GI | 148255593 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA AGATCCTCAT CGCCAATCGC GGCGAAATCG CCCTTCGCAT CCTCAGGGCC
TGCAAGGAGC TCGGCATCTC CACCGTCGCG GTGCATTCCA CCGCGGATGC CGATGCCATG
CATGTCCGTC TCGCCGACGA GAGCGTCTGC ATCGGTCCGC CGCCGTCGAA GGACAGCTAT
CTCAATATCC CTGCTTTGCT CGCCGCCTGC GAGATCACGG GCGCCGACGC CGTCCACCCC
GGCTACGGCT TCCTGTCCGA GAACGCGCGC TTCGCCGAGA TTCTGGCCGA TCACAACCTG
CATTTCATCG GGCCGAAGGC GGAGCACATC CGCCTGATGG GCGACAAGAT CGAGGCCAAG
AAGACCGCGA AGCGGCTCGG CATTCCCGTC GTGCCGGGCT CCGACGGAGC CGTGACGCCC
GACCAGGACG CGATGGCGAT CGCCAAGGAG ATCGGCTTCC CGGTGCTGGT CAAGGCCGCC
GCCGGCGGTG GCGGTCGCGG CATGAAGGTC GCACATACCG AGGCCGACCT GCAGCTGGCG
CTGACCACCG CGGCCAATGA GGCCAAATCG GCATTCGGCG ACGCCTCGGT CTATCTCGAG
AAATATCTGC AGAAGCCGCG TCACATCGAG ATCCAGGTGC TCGGCGACGG CCGCGGCGGC
GCCATCCATC TCGGCGAGCG CGACTGCTCG CTGCAGCGCC GCCACCAGAA GGTCTGGGAG
GAAGGCCCCT CGCCGGTGCT CGACGCCGCC GCCCGCGCCA AGATCGGCAA CACCGTCGCC
AAGGCGATGC AAGAGCTGAA ATATATCGGC GTCGGCACCA TTGAATTCCT CTACGAGGAT
GGCGAGTTCT ACTTCATCGA AATGAACACC CGCATCCAGG TCGAGCATCC CGTGACCGAG
ATGATCACCG GGATCGACCT CGTGCTCGAG CAGATCCGCA TCGCCGCCGG CGGCGACCTG
CCGATGACCC AGGATCAGGT CGTCATCAAC GGCCACTCCA TCGAGTGCCG CGTCAATGCG
GAAAACCCCG TCACCTTCCG ACCCTCGCCC GGCAAGATCC TGCAATACCA TCCGCCCGGC
GGTCTCGGCG TCCGGATCGA TTCCGCCGTC TACCAGGGCT ATGTGATCCC GCCTTATTAC
GACTCGCTGG TCGGCAAGCT GATCGTGCAC GGCAAGAGCC GGGTCGAGTG CCTGATGCGG
CTGCGCCGCG CGCTGGACGA GATGGTGGTC GACGGTATCG AGACGACCCT GCCGCTGTTC
CGCGCCCTGG TTCGGGAGCC CGCCATCATC GACGGCGATT ATCACATCCA CTGGCTCGAG
CAGTACCTGG CCGGCCAGCA GACGGACTGA
|
|---|
| Protein sequence | MFDKILIANR GEIALRILRA CKELGISTVA VHSTADADAM HVRLADESVC IGPPPSKDSY
LNIPALLAAC EITGADAVHP GYGFLSENAR FAEILADHNL HFIGPKAEHI RLMGDKIEAK
KTAKRLGIPV VPGSDGAVTP DQDAMAIAKE IGFPVLVKAA AGGGGRGMKV AHTEADLQLA
LTTAANEAKS AFGDASVYLE KYLQKPRHIE IQVLGDGRGG AIHLGERDCS LQRRHQKVWE
EGPSPVLDAA ARAKIGNTVA KAMQELKYIG VGTIEFLYED GEFYFIEMNT RIQVEHPVTE
MITGIDLVLE QIRIAAGGDL PMTQDQVVIN GHSIECRVNA ENPVTFRPSP GKILQYHPPG
GLGVRIDSAV YQGYVIPPYY DSLVGKLIVH GKSRVECLMR LRRALDEMVV DGIETTLPLF
RALVREPAII DGDYHIHWLE QYLAGQQTD
|
|---|
| |