| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4140 |
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| Symbol | rimO |
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| ID | 5152346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4346886 |
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| End bp | 4348211 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558970 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001240108 |
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| Protein GI | 148255523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.124095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG GTTCCGCGCC CAAGATCAGC TTTGTTTCGC TCGGATGTCC AAAGGCGCTG
GTCGATTCCG AGCGCATCAT CACCCGGCTT CGGGCGGAGG GCTACGAGCT GGCCCGCAAA
CATGACGGCG CCGACGTCGT GATCGTCAAC ACCTGCGGCT TCCTGGATAG CGCCAAGCAG
GAATCGCTCT CTGCGATCGG CTCGGCCATG GCCGAGAACG GCAAGGTCAT CGTCACCGGC
TGCATGGGCG CCGAACCCGA ACAGATCGAA CAGGCCTATC CGGGCGTGCT GTCGATCACC
GGGCCCCAGC AGTACGAGAG CGTGCTCGAG GCCGTTCACC GGGCGTCGCC GCCGATCCAC
AACCCTCATC TGGACCTGGT TCCCCCGCAG GGCATCAAGC TGACGCCTCG TCATTACGCC
TATCTGAAAA TTTCCGAGGG CTGCAACAAC CGCTGCACCT TCTGCATCAT CCCGAAACTG
CGTGGCGATC TCGTGTCCCG ACCCGCCGCC GACGTGCTGC GCGAGGCCGA ACGTCTGGTG
GCCGCCGGGG TCAAGGAGCT CCTGGTGATC TCCCAGGATA CCTCGGCCTA CGGGCTGGAC
CTGAAATATG CCGAGAGCAG CTGGAAGGAC CGCAGCGTCA GAGCGCGCTT CCTGGACCTC
GCCCGCGAGC TCGGCGAACT CGGCGCCTGG GTCCGGCTGC ACTACGTCTA TCCCTACCCG
CATGTCGACG AGGTCGTCGG GCTGATGGCC GAGGGCCGTG TGCTGCCCTA TCTCGACATT
CCCTTCCAGC ATGCCAGCCC CAATGTCCTC AAGGCGATGC GCCGGCCGGC CGCCCAGGAC
AAGACGCTGG ATCGCATCAA GAGCTGGCGG GCGGCCTGTC CGGATCTGGC GTTGCGCTCG
ACCTTCATTG TCGGCTTTCC CGGCGAAACC GATGCGGACT TCGCCTACCT GCTCGATTGG
CTCGACGAGG CCGAGATCGA TCGTCTCGGC TGCTTCAAAT ACGAGCCGGT GGCGGGCGCG
ACGTCCAACG CCCTGCCCGA TCAGGTTCCG GACGAAGTCA AGCAGGAGCG CTGGAACGCG
TTGATGGCGC GCCAGCAGAA GATCTCGGCG CGTCGCCTCA AGCGCAAGGT CGGAACCCGC
CAGCAGATCA TTATCGACGA GGTCGGTCCG ACCGTGGCCA AGGGCCGTTC CAAGGCTGAC
GCTCCGGAGA TCGACGGCTC GGTCTACGTC TCCAGCCGCC GTCCCCTTCG CGTCGGCGAG
ATCGTCACGG CCAGGATCGA GCGCGCTGAC GAATATGACC TGCACGGTAC GGTCGCCGGC
TTCTGA
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| Protein sequence | MQQGSAPKIS FVSLGCPKAL VDSERIITRL RAEGYELARK HDGADVVIVN TCGFLDSAKQ
ESLSAIGSAM AENGKVIVTG CMGAEPEQIE QAYPGVLSIT GPQQYESVLE AVHRASPPIH
NPHLDLVPPQ GIKLTPRHYA YLKISEGCNN RCTFCIIPKL RGDLVSRPAA DVLREAERLV
AAGVKELLVI SQDTSAYGLD LKYAESSWKD RSVRARFLDL ARELGELGAW VRLHYVYPYP
HVDEVVGLMA EGRVLPYLDI PFQHASPNVL KAMRRPAAQD KTLDRIKSWR AACPDLALRS
TFIVGFPGET DADFAYLLDW LDEAEIDRLG CFKYEPVAGA TSNALPDQVP DEVKQERWNA
LMARQQKISA RRLKRKVGTR QQIIIDEVGP TVAKGRSKAD APEIDGSVYV SSRRPLRVGE
IVTARIERAD EYDLHGTVAG F
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