| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4095 |
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| Symbol | |
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| ID | 5154596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4293646 |
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| End bp | 4295532 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558928 |
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| Product | TRAP-type C4-dicarboxylate transporter small and large permease |
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| Protein accession | YP_001240067 |
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| Protein GI | 148255482 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0585194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATG CCGAGTTCAC GGAAATTGCG ATCAGCGAGG TGGTCATCGA GACCCATCGC
CGCCGATCCT TTCTCGATAC GCTCGAGGCG GGGCTGGGTC TCCTGGTGGA GATTCCGGCC
GCGCTGCTGG TGGTCGCCGA GATCGTGATC CTGTTCGCGG GCGTCGTTGC CCGCTATGTG
CTGCACAAGC CGCTGATCTG GTCGGACGAA CTGGCCTCGA TCCTGTTCCT GTGGCTCGCG
ATGCTCGGCG CGGCGGTCGC GTTCCGCCGC GGCGAGCACA TGCGCATGAC GGCACTGGTG
GCGCGCGCGA GTCCCGGCCT GCGCGCTTTT CTCGATCTCG TCGCGACGGC GGCCGCATTG
TCCTTCCTGG TCATGATCGC CTGGCCGTCA TGGGAGTATG CCTACGAGGA AAGCTACATC
ACGACGCCGG CGCTGCAGAT CGCCAACATC TGGCGCGCCG CGGCGTTGCC GGTCGGCATC
GGGTTGATGG CGCTGTTCGC GCTGATCCGC CTCGCCCGCG CCGCGCGTCC CAGGACGATG
CTGCTGGCGG TGTTTTCGAT TGCGGCCATC GTGGCGCTGT TCTGGGTGGC GCAGCCGGTG
CTGAAGCCGC TCGGCAACCT CAATCTCGTG ATCTTCTTCG TCGGCGTGGT CGGCTTCTGC
GTGTTCGCCG GCGTTCCGAT CGCCTTTGCC TTCGGGCTCG CGATCTTCGG CTATCTGGCT
CTGACGACGC GCACGCCACT GATGGTGCTG GTCGGGCGCA TGGACGAGGG CATGAGTCAC
CTCATCCTGC TGTCGGTGCC GCTGTTCGTC TTCCTGGGCC TATTGATCGA GATGACCGGC
ATGGCGCGGG CGATGGTCGC GTTCCTGGCG AGCCTGCTGG GGCATGTCCG CGGCGGACTA
CACTACGTGC TGGTCGGCGC GATGTATCTC GTCTCGGGGA TTTCCGGCGC CAAGGCGGCC
GACATGGCGG CGGTCGCGCC GGTGCTGTTT CCGGAGATGA AGGCGCGCGG CGCCCGTCCC
GGCGATCTCG TCGCCCTGCT CGCCGCCACC GGCGCGCAGA CCGAGACGAT TCCGCCGAGC
CTGGTGCTGA TCACGATCGG CTCGGTCACC GGCGTGTCGA TCGCGGCGCT GTTTACCGGC
GGCCTGCTGC CGGGCGTGGT TCTGGCCGTC ACGCTGTGCG CGCTGGTGTG GTGGCGCTAT
CGCCACGAGG ACATGAGCGG GGTGCGCCGC GCGACCGGCG CCGAGATCGG CAAGGCGTTC
ATCGTCTCGC TCCCTGCCCT GGCCCTGCCC TTCGTGATCC GCGCCGCCGT GGTCGAGGGC
ATCGCCACAG CGACGGAAGT CTCGACCATC GGCATCGTCT ATGGCGTGCT CGCCGGCCTC
CTGGTCTATC GCCGCTTCGA CTGGCGTCGG CTGATGCCGA TGCTGATCGA GACGGCGGCG
CTGTCCGGCG CGATCCTGCT GATCATCGGC ACGGCGACCG GCATGGCCTG GGGCCTGACC
CAGTCCGGCT TCTCGCGCGC GCTGGCAGCG GCCATGACGG GCTTGCCGGG CGGCCCGGCG
ACGTTCATCG CGGTCTCGAT CGTGGCCTTC ACCATCCTCG GCAGCGTGCT GGAGGGCATT
CCGGCGATCG TGCTGTTCGG GCCGCTGCTG TTTCCGATCG CCCGGGCCGT CGGCGTACAC
GAGGTGCATT ATGCCATGGT GATCATCCTG GCGATGGGAA TCGGCCTGTT CGCGCCGCCA
TTCGGGGTCG GATATTACGC CGCCTGCGCC ATCGGCCGGG TCGATCCCGC CGAGGGCATC
CGCCCGATCT GGGGCTACCT GCTGGCGCTT CTCATCGGCC TGATCATCGT TGCGATTTTT
CCGTGGATTT CGATCGGGTT CCTGTAA
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| Protein sequence | MAHAEFTEIA ISEVVIETHR RRSFLDTLEA GLGLLVEIPA ALLVVAEIVI LFAGVVARYV
LHKPLIWSDE LASILFLWLA MLGAAVAFRR GEHMRMTALV ARASPGLRAF LDLVATAAAL
SFLVMIAWPS WEYAYEESYI TTPALQIANI WRAAALPVGI GLMALFALIR LARAARPRTM
LLAVFSIAAI VALFWVAQPV LKPLGNLNLV IFFVGVVGFC VFAGVPIAFA FGLAIFGYLA
LTTRTPLMVL VGRMDEGMSH LILLSVPLFV FLGLLIEMTG MARAMVAFLA SLLGHVRGGL
HYVLVGAMYL VSGISGAKAA DMAAVAPVLF PEMKARGARP GDLVALLAAT GAQTETIPPS
LVLITIGSVT GVSIAALFTG GLLPGVVLAV TLCALVWWRY RHEDMSGVRR ATGAEIGKAF
IVSLPALALP FVIRAAVVEG IATATEVSTI GIVYGVLAGL LVYRRFDWRR LMPMLIETAA
LSGAILLIIG TATGMAWGLT QSGFSRALAA AMTGLPGGPA TFIAVSIVAF TILGSVLEGI
PAIVLFGPLL FPIARAVGVH EVHYAMVIIL AMGIGLFAPP FGVGYYAACA IGRVDPAEGI
RPIWGYLLAL LIGLIIVAIF PWISIGFL
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