Gene BBta_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4005 
Symbol 
ID5150447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4212291 
End bp4213082 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID640558837 
Producthypothetical protein 
Protein accessionYP_001239978 
Protein GI148255393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.52012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCG AACCCCGCTC GCCGCGTCTG GCCGTGCTCA TCGACGCCGA CAATGCCTCG 
GCCAAGATCG TCGACGGGCT GTTCGAGGAG ATCGCCAAGA TCGGCGAAGC CAGCGTGCGC
CGGATCTATG GCGACTTCTC CAGCCCGCGC TCGAAGCCGT GGGCCGATAC GCTGGCGCGA
CATGCGATCG TGCCGCAGCA GCAGTTCGCC TATACGACCG GCAAGAATGC CTCCGACATC
ACGCTGGTGA TCGACGCGAT GGACCTGCTG CATAGCGGGC GGTTCGACGG CTTCTGCCTG
GTGTCGTCGG ACAGCGACTT CACGCGGCTG GCCGCGCGCA TCCGCGAACA GGGCATCGAC
GTGTTCGGCT TCGGCGAGCA GAAGACGCCG GAGAGCTTCC GGCAGGCCTG CCGCCGGTTC
ATCTACACGG AGAACTTGCG CAGCGACGCT GCGAGCAGCA AGGACGCGGA CAGCGCGGCA
GTGCCGAAGT CGCTGCTGCC GGTCAGCGCG GCGACGCCGA TGATCAAGAA GGTCATCACG
CAGATGGAGA GCGAGGACGG CTGGGTCGCG CTCGGCGAGG TCGGCAAGCA GCTCTCCAAC
CTGGTGTCCG ACTTCGACCC GCGTACCTAT GGCTGCCGCA AGCTGAGCGA TCTCGTCCGC
AAGACCGGAG GCTTCGAGAT CGAGGAGCAG TCGAAGGGCG GTGGCTCGGT GCGCATCCGC
GTCAAGGCGG CGACCGCGCC GCAACCCAGG GCGAGAGCGC CGAGGGGCCA CCGCGAGGCG
GCCAAGCCGT GA
 
Protein sequence
MASEPRSPRL AVLIDADNAS AKIVDGLFEE IAKIGEASVR RIYGDFSSPR SKPWADTLAR 
HAIVPQQQFA YTTGKNASDI TLVIDAMDLL HSGRFDGFCL VSSDSDFTRL AARIREQGID
VFGFGEQKTP ESFRQACRRF IYTENLRSDA ASSKDADSAA VPKSLLPVSA ATPMIKKVIT
QMESEDGWVA LGEVGKQLSN LVSDFDPRTY GCRKLSDLVR KTGGFEIEEQ SKGGGSVRIR
VKAATAPQPR ARAPRGHREA AKP