| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3968 |
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| Symbol | sufD |
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| ID | 5151530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4175477 |
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| End bp | 4176799 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640558803 |
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| Product | sufD, needed for fhuF Fe-S center production/stability |
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| Protein accession | YP_001239944 |
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| Protein GI | 148255359 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.287239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAG CTTTGGTCAA GAACGACAGC GGTCCGGCGG CAAGCAGCGT GTTTGCTGCC
GCGCAAGGCC GGCTGCCCGG CGCCGGCAAG GTGGCGGATA TCCGGCGCGA GGCCTTTGCT
GCCTTCGAGC GCACGGGCCT GCCGCACCGG CGCATCGAGG AGTGGAAGTA CACCGATTTG
CGCGCCCTCG TGCGTGAGGT GCTGCCGCTC GCCGGTACGC CCGACGCGGC TGCGTTGGCG
CGCGCCAAGG TCGCGATCGC GTCGGTCGCG ATCGACGGGG CGACCAAGAT CGTGCTGGTC
GATGGTGTGG TTGCGCTCGA GCTGTCCGAT CTCGCGGCAT TGCCGTCCGG GGTGTCCGTG
CGCACGCTGC GCGCCCTGCT GGACGAGCAG TCCAACGAGT CCCGCGGCGA CCTGCTGCTG
ACCAAGGCCA GCGATCCGAT GCTGTCGCTC AACGCGGCGC TCGCGACCGA TGGCGTCGTG
GTCACGGTGG CGGACGGCGT GCAGCTGTCG TCGCCGCTGC AGCTCATTCA CGTCGCCACC
GCCTCCAAGG TGGCGCGCTA CAGCCGCTCT CATGTGCTGA TAGGGCAGGG CGCCCGCGCT
GCGCTGGTCG AGAATTCGAT CGCCGCCGAG GGCGCTGCCG CCTATCAGGC CAATGATGCC
GCGGTGATCT GGGTCGGCGA CGAGGCCGCG CTGTCGCATG TGCGGCTGAT GCGGGACGCA
ACCGATGTCG TGAACGTCTC GTCCGAACTG TTCACGGTCG GCGCGAAATC GAAGCTCAGC
CTGTTCAACA TGACCAGCGG CGGCGCGGTC AGCCGGCTGC AGGCCTTCAT CACGCTCGCC
GGTGAAGCCA GCGAGCTGAT CGTCAACGGC GTCAACCTGC TGCGTGACAA GCAGCATGGC
GACATGACCT TGGTCGTCGA CCACGCGGTG CCCGGCTGCA CCAGCCGCGA GAATTTCCGC
GCGGTGCTCG ACGATCGCGC GCACTCGGTG TTCCAGGGGC GCATCATCGT GCGCCAGGAC
GCGCAGCAGA CCGACGGCAA GATGATGACG CGGGCGCTGC TGCTGTCCGA CGAGGCCGAG
GCCGACAGCA AGCCGGAGCT CGAGATCTTC GCCGACGACG TCTCCTGCGG CCATGGCGCC
ACGGCCGGCG CGCTCGACGA CAGCCTGCTG TTCTATCTGC AGGCGCGCGG CCTGCCGGAA
AAGCAGGCGC AGGCGCTGCT GATCCAGGCC TTCGTCGGCG AGGCGATCGA GGCGATCGAG
GACGACGACT TGCGCGAACG CGTCATCGCC GCCGCCCAGG ATTGGCTGGA GGCCCGCGCA
TGA
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| Protein sequence | MNVALVKNDS GPAASSVFAA AQGRLPGAGK VADIRREAFA AFERTGLPHR RIEEWKYTDL
RALVREVLPL AGTPDAAALA RAKVAIASVA IDGATKIVLV DGVVALELSD LAALPSGVSV
RTLRALLDEQ SNESRGDLLL TKASDPMLSL NAALATDGVV VTVADGVQLS SPLQLIHVAT
ASKVARYSRS HVLIGQGARA ALVENSIAAE GAAAYQANDA AVIWVGDEAA LSHVRLMRDA
TDVVNVSSEL FTVGAKSKLS LFNMTSGGAV SRLQAFITLA GEASELIVNG VNLLRDKQHG
DMTLVVDHAV PGCTSRENFR AVLDDRAHSV FQGRIIVRQD AQQTDGKMMT RALLLSDEAE
ADSKPELEIF ADDVSCGHGA TAGALDDSLL FYLQARGLPE KQAQALLIQA FVGEAIEAIE
DDDLRERVIA AAQDWLEARA
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