| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3931 |
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| Symbol | |
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| ID | 5150837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4120913 |
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| End bp | 4122436 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558764 |
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| Product | multidrug efflux system outer membrane subunit |
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| Protein accession | YP_001239907 |
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| Protein GI | 148255322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.436202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATCG TGCAGATCGC CGTCGACGAG CCTCGCCGCG CGCCCGCTGA GACGCGGACC
GTTGCCGGGA AGCGGGAGAG CCGCGTGTCC GCGGGCCTGC GGCATTTCGT CCGCTGGTTC
GCGGCGATCG GTCTGGCGGT CAACGCCGCT GGCTGCCTGC TGACGCAGGA CATTCCGGAT
CCGGCCCTCG ACATTCCCAA CCGGTACAAG TCGGCCGCCG GCGCGGACAT GGCTGCGCCG
CCGACGCTCG ACTGGTGGCG GGGCTTCGGC TCCCGTGAGC TGACTCAGCT GATGGAGGAG
GCGCAAAGCG TCAACCTCGA CATCGCCGCC GCCGTCGCGC GCTTCCGGCA GGCTGATGCG
CTGGCGCGGC AGGCCGGCGC GGCGCTGCTG CCGAGCCTGT CCACGACCGG CCAGGAGACC
TATTCGCGCA CGTCAGGCTC GAGCTCGAGC GGGCTCACCA ATGGCGGCCG CGAGGTCGTC
AATTATCAGG CCTCGCTGTC GGCGAGCTAT CAGCTCGACT TCTTCGGCCA GAACCGCGAC
GCCCTGCAGG CCGCGGAGGA GACGGCGGTC GCCAACCGCT TCGACCGCGA CGTCACCCAG
CTGACGACAC TGGCCACCGT CGCCAATGCC TATTTCCAGG TGCTGGCGGC GCAGGATCGG
ATCCGCACCG CCGAGCGCAA CATCGCCAGC GCCACCCGCG TGCTCGACGC CATCCGCGAG
CGCCAGAAGG CCGGCACCGG CAACGACCTC GACGTTGCCC AGCAGGAGAG CGTGCTTGCC
AACCAGAAGG CGGCGGTCCC GCCGCTGCGC CAGACGCTGG ACCAGAACGT CAATGCGCTC
GCCGTCCTGG TGGCGAGATC GCCCGAGGGC ATTCGCGTCA GTGGCGGCTC GCTCGACCAG
ATCAAGACGC CGCGGGTGAC GCCGGGGCTC CCGTCCGAAC TGCTGACGCA GCGGCCGGAC
ATTCGCCGTC AGGAAGCGCA GCTGGCCTCC GCGACCGCCA ATGTCGGCAG TGCGCGGGCG
CAGTTCTTTC CGAGCATCCA GCTGACCGGC AATGGCGGTT ACCAGAGCGC GGCACTGGTC
TCGCTGTTCC AGCCGCACGC GGCATTTTTC AGCCTCGCGG GCAGCCTGAC CCAGCCGATC
TTTGATGGCG GCCGGATTCT CGGCAATTTC GAGAACGCAA AAGCGCGCCA GGATGAACTG
CTGCAAACCT ATCGCAAGAC CGTCATCCAG GCCTTCACCG ACGTGAACAA CGCGTTGTTC
GCGATCAAGC AGACGACAAT CCGATTGCAA TTGCAGCGTC AGGTCGTCGC CGCGTCGCGG
CGGGCCTTCG AATTGTCGGA GCAGCAGCTG CGCGCAGGCA CTGCCGACAT CGTGACCGTC
TTGAACACGC AATTGACGCT GTTCCAGGCG GAGGACGCGT TATGGCAGGC CCAGCTGGCG
CGGCTGCAGG CGTTCGTCAG CCTGTATCAG GCGCTGGGCG GCGGCTGGGA GCCGCGCATG
GAGAAGTCGG CCGATGCTCT TTAA
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| Protein sequence | MSIVQIAVDE PRRAPAETRT VAGKRESRVS AGLRHFVRWF AAIGLAVNAA GCLLTQDIPD
PALDIPNRYK SAAGADMAAP PTLDWWRGFG SRELTQLMEE AQSVNLDIAA AVARFRQADA
LARQAGAALL PSLSTTGQET YSRTSGSSSS GLTNGGREVV NYQASLSASY QLDFFGQNRD
ALQAAEETAV ANRFDRDVTQ LTTLATVANA YFQVLAAQDR IRTAERNIAS ATRVLDAIRE
RQKAGTGNDL DVAQQESVLA NQKAAVPPLR QTLDQNVNAL AVLVARSPEG IRVSGGSLDQ
IKTPRVTPGL PSELLTQRPD IRRQEAQLAS ATANVGSARA QFFPSIQLTG NGGYQSAALV
SLFQPHAAFF SLAGSLTQPI FDGGRILGNF ENAKARQDEL LQTYRKTVIQ AFTDVNNALF
AIKQTTIRLQ LQRQVVAASR RAFELSEQQL RAGTADIVTV LNTQLTLFQA EDALWQAQLA
RLQAFVSLYQ ALGGGWEPRM EKSADAL
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