| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3869 |
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| Symbol | |
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| ID | 5148878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4053764 |
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| End bp | 4055323 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558706 |
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| Product | putative ABC-type branched-chain amino acid transport system, periplasmic component |
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| Protein accession | YP_001239850 |
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| Protein GI | 148255265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.222307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC GCTGGTCTGT GCTCCTGCTC GGAACTTGCT TCCTTCTCCC TGCGGCCCCC
GCGCTCGCGG CCGTGTCTCC CGATGTCGTT CGCGATCTCG CTTCGCGGGT CGGCCCTGTC
ATCGGTCAGG CCGCGACTTG TCCGGCCATT GCCCAGGGAC GCGTCCAGAC CATCATCGAT
CAGTTCGGCG AGGTCATCCG TCAGGCCGCG TCGACGACCA CCGAGCGCGA TCTGCTCATC
CGCAGCTTCA ACAGCTCCAT CGCCGAGGGG CGCGGCCGGA TCGCATCCGC GCAGGTGAAC
TGTCAGACGG CAGAACGCCA ATTGTCCGAG CTCGAGCGCT CGCTCAGCCA GCAGCCATCG
GCCGCTCCGA CGATGTCCCT TACGCTGGCG CCGTCAAGCG CAGCGGCGGC GACGCAGCCC
ACCGCCAACC TTCCGCCGCC GCTTCCGCAC GGCGTCAGCG ACACCGAAAT CCGTTTCGGC
ACCGTGATTC CCTTCTCGGG CGTGCGCAAG GAGTCCGCGC GTCAGATGAA GCTCGGCATC
GAGACCGCGT TCAACCGCGT CAACGACGCC GGCGGGATCA ACGGCCGCAA GCTGAGACTG
ATCGCGGCCG ATGACGTCTA TGATCCCACC CGCACGCTCG CCGCCATGAC GCAGCTCTAC
GAGAAGGATA AGGTGTTCGG CTTCATCGGC AATATGGGCA CCGCCAACAA TGCGGTGGCG
ATCCCCTATG CGCTGGAGCG CCGCGCGCTG TTCTTTGCGC CCTATAGCGG CTCGGCCGTG
GTTCGCCGCG ACCCGCCCGA CCGCTACGTC TTCAACTATC GTGCGAGCTA TGCCGAGGAG
ACCGCCGCGA TCGTGCACTA TCTGATGAAG GTCAAGCGCA TCCCGGCGAA ACAGATCGCA
GTCTTCGCGC AGAACGATGC CTATGGCGAC GATGGCGCCA ACGGTGTCGC CAAGGCGTTC
CGCGCGCTCG GCATCACCGA TCCGATCATC CGCTACGGCT TCCCGCGCGG CACGTTGGAG
GTCGACGACG CCGTCGGCAA GCTGAAGGCG CAGACCAAGC CGCCGATCAA GGCCGTGATC
ATGATCGCGA CCGACCGAGC CGCGGCGAAA TTCATCGAGA AGACCCACGA GGCGGCTCCG
GGACTGATCT ACGCCAACAT CTCGGCTGTC GGCTCTTCGT CTCTCGCCGC CGAGCTGAAG
CTGCTCGGCA CGAAATACAC CAATGGCGTG ATCGTCACGC AGGGGGTCCC CTCGGTGGCC
GGCTATTCGA GCCTCGTGCT CGACTACAAG AATGCGCTGG ACAAGTACTT CCCCGGCGAA
GCGCCGGACT ACACCTCACT GGAGGGCTTC ATCTCGGCGA GCATCCTGAT TCAGGCGCTG
AAACAGACGA CGCCGCTCGA CACCGAGCGA CTGGTCGATA CGCTGGAATC GATGAAGAGC
ATCGATCTCG GCCTCGGCAG CACGCTCTCG TTCGGACGCG CCGAGCACCA GGCCTCGCAC
AAGATCTGGG GCACAGCGCT CGACGAGACC GGTACCTACC AGGCGATCGA GCTGGAATGA
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| Protein sequence | MTVRWSVLLL GTCFLLPAAP ALAAVSPDVV RDLASRVGPV IGQAATCPAI AQGRVQTIID
QFGEVIRQAA STTTERDLLI RSFNSSIAEG RGRIASAQVN CQTAERQLSE LERSLSQQPS
AAPTMSLTLA PSSAAAATQP TANLPPPLPH GVSDTEIRFG TVIPFSGVRK ESARQMKLGI
ETAFNRVNDA GGINGRKLRL IAADDVYDPT RTLAAMTQLY EKDKVFGFIG NMGTANNAVA
IPYALERRAL FFAPYSGSAV VRRDPPDRYV FNYRASYAEE TAAIVHYLMK VKRIPAKQIA
VFAQNDAYGD DGANGVAKAF RALGITDPII RYGFPRGTLE VDDAVGKLKA QTKPPIKAVI
MIATDRAAAK FIEKTHEAAP GLIYANISAV GSSSLAAELK LLGTKYTNGV IVTQGVPSVA
GYSSLVLDYK NALDKYFPGE APDYTSLEGF ISASILIQAL KQTTPLDTER LVDTLESMKS
IDLGLGSTLS FGRAEHQASH KIWGTALDET GTYQAIELE
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