Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3864 |
Symbol | aspS |
ID | 5150013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4048007 |
End bp | 4049779 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558702 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001239846 |
Protein GI | 148255261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.32606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCT ACCGGACCCA TACCTGCGGC GCGCTCCGCG ACAGCAACAT CGGAGAGACG GTCCGGCTGT CCGGCTGGTG CCATCGCATC CGCGACCATG GTGGCGTGCT GTTCGTCGAC CTGCGCGACC ATTACGGCAT CACCCAATGC GTCGTCGATC CCGATTCCAA GGCGTTCGGC CTCGCCGAGA AGCTGCGCTC GGAATGGGTC GTGCGCATGG AGGGCAAGGT CCGCCGCCGC CCCGAGGGCA CCGACAATGC CGAGCTGCCG ACCGGCCAGG TCGAGCTTTA CGTCGCCGAC ATCGAGGTGC TGGGCCCCGC CGCCGAGCTG CCGCTGCCGG TGTTCGGCGA GCAGGAGTAT CCCGAGGACA TCCGGCTGAA ATACCGCTTC CTCGATTTGC GCCGCGAGAA GCTGCACCAG AACATCATGA CCCGCGGCGC GATCATCGAT TCGATGCGCC GGCGCATGAA GGAGCAGGGC TTCTTCGAAT TCCAGACGCC GATCCTGACC GCGTCCTCGC CGGAGGGCGC GCGCGACTTC CTGGTGCCGT CGCGCATCCA TCCCGGCAAG TTCTACGCCC TGCCGCAGGC GCCGCAGCAG TACAAGCAGC TGCTGATGAT GTCGGGCTTC GACCGCTACT TCCAGATCGC GCCGTGCTTC CGCGACGAGG ATCCGCGCGC CGACCGTCTG CCCGGCGAGT TCTATCAGCT CGACGTCGAG ATGAGCTTCG TCGAGCAGGA GGACGTGTTC GCGGCGATGG AGCCGGTGAT CACCGGCGTG TTCGAGGATT TCGCCAAGGG CAAGCCGGTG ACCAAGGGCT GGCCGCGCAT CCCGTTCGCC GAGGCGCTGC GCAAATACGG CACCGACAAG CCGGACCTGC GCAACCCGAT CGAGATGCAG GACGTCTCCG AGCACTTCCG CGGCTCCGGC TTCAAGGTGT TCGCGCGCAT GCTCGAGGAC ACGAAGAACC AGGTCTGGGC GATCCCAGCT CCGGGCGGCG GCAGCCGTGC GTTCTGCGAC CGCATGAACT CATGGGCTCA AGGAGAAGGC CAGCCGGGCC TCGGCTACAT CATGTGGCGC GAGGGCGGCG AGGGCGCAGG TCCGCTCGCC AACAACATCG GCCCGGAGCG CACCGCTGCG ATCAGGACGC AACTCGGAAC CAAGGAGGGC GACGCCGCCT TCTTCGTCGC CGGTGATCCC GAGAAATTCT GGAAGTTCGC AGGCCTCGCC CGCACCAAGG TCGGCGAGGA ATTGAACCTG ATCGACAAGG ACCGGTTTGC TCTGGCCTGG ATCGTCGACT TCCCGATGTA CGAGTACAAT GAGGACGACA AGAAGGTCGA CTTCTCGCAC AACCCGTTCT CGATGCCGCA GGGCGGCCTC GAGGCCCTGC AGACCAAGGA CCCGCTGACC ATCAAGGCGT TCCAGTACGA CATCGCCTGC AACGGCTATG AGATCGCCTC CGGCGGCATC CGCAACCACA AGCCGGAAGC GATGGTGAAG GCGTTCGAGA TCGCGGGCTA TGGCGAGCAG GAAGTGGTCG ACCGCTTCGG CGGCATGTAC CGCGCCTTCC AATACGGCGC GCCGCCGCAT GGCGGCATGG CCGCCGGCGT TGACCGCATC GTGATGCTGC TCTGTGGCAC CACCAACCTG CGCGAGATCT CGCTGTTCCC GATGAACCAG CAGGCCATGG ACCTCCTGAT GGGCGCGCCG TCGGAAGCGA CCACCAAGCA GCTCCGCGAG CTGCACATCA GGACCAACCT GCCGAACAAA TAG
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Protein sequence | MHRYRTHTCG ALRDSNIGET VRLSGWCHRI RDHGGVLFVD LRDHYGITQC VVDPDSKAFG LAEKLRSEWV VRMEGKVRRR PEGTDNAELP TGQVELYVAD IEVLGPAAEL PLPVFGEQEY PEDIRLKYRF LDLRREKLHQ NIMTRGAIID SMRRRMKEQG FFEFQTPILT ASSPEGARDF LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE MSFVEQEDVF AAMEPVITGV FEDFAKGKPV TKGWPRIPFA EALRKYGTDK PDLRNPIEMQ DVSEHFRGSG FKVFARMLED TKNQVWAIPA PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR EGGEGAGPLA NNIGPERTAA IRTQLGTKEG DAAFFVAGDP EKFWKFAGLA RTKVGEELNL IDKDRFALAW IVDFPMYEYN EDDKKVDFSH NPFSMPQGGL EALQTKDPLT IKAFQYDIAC NGYEIASGGI RNHKPEAMVK AFEIAGYGEQ EVVDRFGGMY RAFQYGAPPH GGMAAGVDRI VMLLCGTTNL REISLFPMNQ QAMDLLMGAP SEATTKQLRE LHIRTNLPNK
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