Gene BBta_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3864 
SymbolaspS 
ID5150013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4048007 
End bp4049779 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content66% 
IMG OID640558702 
Productaspartyl-tRNA synthetase 
Protein accessionYP_001239846 
Protein GI148255261 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.32606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCT ACCGGACCCA TACCTGCGGC GCGCTCCGCG ACAGCAACAT CGGAGAGACG 
GTCCGGCTGT CCGGCTGGTG CCATCGCATC CGCGACCATG GTGGCGTGCT GTTCGTCGAC
CTGCGCGACC ATTACGGCAT CACCCAATGC GTCGTCGATC CCGATTCCAA GGCGTTCGGC
CTCGCCGAGA AGCTGCGCTC GGAATGGGTC GTGCGCATGG AGGGCAAGGT CCGCCGCCGC
CCCGAGGGCA CCGACAATGC CGAGCTGCCG ACCGGCCAGG TCGAGCTTTA CGTCGCCGAC
ATCGAGGTGC TGGGCCCCGC CGCCGAGCTG CCGCTGCCGG TGTTCGGCGA GCAGGAGTAT
CCCGAGGACA TCCGGCTGAA ATACCGCTTC CTCGATTTGC GCCGCGAGAA GCTGCACCAG
AACATCATGA CCCGCGGCGC GATCATCGAT TCGATGCGCC GGCGCATGAA GGAGCAGGGC
TTCTTCGAAT TCCAGACGCC GATCCTGACC GCGTCCTCGC CGGAGGGCGC GCGCGACTTC
CTGGTGCCGT CGCGCATCCA TCCCGGCAAG TTCTACGCCC TGCCGCAGGC GCCGCAGCAG
TACAAGCAGC TGCTGATGAT GTCGGGCTTC GACCGCTACT TCCAGATCGC GCCGTGCTTC
CGCGACGAGG ATCCGCGCGC CGACCGTCTG CCCGGCGAGT TCTATCAGCT CGACGTCGAG
ATGAGCTTCG TCGAGCAGGA GGACGTGTTC GCGGCGATGG AGCCGGTGAT CACCGGCGTG
TTCGAGGATT TCGCCAAGGG CAAGCCGGTG ACCAAGGGCT GGCCGCGCAT CCCGTTCGCC
GAGGCGCTGC GCAAATACGG CACCGACAAG CCGGACCTGC GCAACCCGAT CGAGATGCAG
GACGTCTCCG AGCACTTCCG CGGCTCCGGC TTCAAGGTGT TCGCGCGCAT GCTCGAGGAC
ACGAAGAACC AGGTCTGGGC GATCCCAGCT CCGGGCGGCG GCAGCCGTGC GTTCTGCGAC
CGCATGAACT CATGGGCTCA AGGAGAAGGC CAGCCGGGCC TCGGCTACAT CATGTGGCGC
GAGGGCGGCG AGGGCGCAGG TCCGCTCGCC AACAACATCG GCCCGGAGCG CACCGCTGCG
ATCAGGACGC AACTCGGAAC CAAGGAGGGC GACGCCGCCT TCTTCGTCGC CGGTGATCCC
GAGAAATTCT GGAAGTTCGC AGGCCTCGCC CGCACCAAGG TCGGCGAGGA ATTGAACCTG
ATCGACAAGG ACCGGTTTGC TCTGGCCTGG ATCGTCGACT TCCCGATGTA CGAGTACAAT
GAGGACGACA AGAAGGTCGA CTTCTCGCAC AACCCGTTCT CGATGCCGCA GGGCGGCCTC
GAGGCCCTGC AGACCAAGGA CCCGCTGACC ATCAAGGCGT TCCAGTACGA CATCGCCTGC
AACGGCTATG AGATCGCCTC CGGCGGCATC CGCAACCACA AGCCGGAAGC GATGGTGAAG
GCGTTCGAGA TCGCGGGCTA TGGCGAGCAG GAAGTGGTCG ACCGCTTCGG CGGCATGTAC
CGCGCCTTCC AATACGGCGC GCCGCCGCAT GGCGGCATGG CCGCCGGCGT TGACCGCATC
GTGATGCTGC TCTGTGGCAC CACCAACCTG CGCGAGATCT CGCTGTTCCC GATGAACCAG
CAGGCCATGG ACCTCCTGAT GGGCGCGCCG TCGGAAGCGA CCACCAAGCA GCTCCGCGAG
CTGCACATCA GGACCAACCT GCCGAACAAA TAG
 
Protein sequence
MHRYRTHTCG ALRDSNIGET VRLSGWCHRI RDHGGVLFVD LRDHYGITQC VVDPDSKAFG 
LAEKLRSEWV VRMEGKVRRR PEGTDNAELP TGQVELYVAD IEVLGPAAEL PLPVFGEQEY
PEDIRLKYRF LDLRREKLHQ NIMTRGAIID SMRRRMKEQG FFEFQTPILT ASSPEGARDF
LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDVE
MSFVEQEDVF AAMEPVITGV FEDFAKGKPV TKGWPRIPFA EALRKYGTDK PDLRNPIEMQ
DVSEHFRGSG FKVFARMLED TKNQVWAIPA PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR
EGGEGAGPLA NNIGPERTAA IRTQLGTKEG DAAFFVAGDP EKFWKFAGLA RTKVGEELNL
IDKDRFALAW IVDFPMYEYN EDDKKVDFSH NPFSMPQGGL EALQTKDPLT IKAFQYDIAC
NGYEIASGGI RNHKPEAMVK AFEIAGYGEQ EVVDRFGGMY RAFQYGAPPH GGMAAGVDRI
VMLLCGTTNL REISLFPMNQ QAMDLLMGAP SEATTKQLRE LHIRTNLPNK