| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3827 |
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| Symbol | pdxA |
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| ID | 5152261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4010657 |
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| End bp | 4011658 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558665 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001239809 |
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| Protein GI | 148255224 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0221753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC CCCTCGCGCT CACATTGGGC GAACCTGCAG GCATCGGCCC CGACATCACC
TTGCAGGCGT GGCTGCGTCG CACCGAGCTT GGACTTCCGG CGTTCTATCT GCTCGGGGAT
CCCGGCTTCA TCAGCCAGCG GGCGACGCTG CTGGGTCTCG ATGTTCCGGT GACGGAGACG
CATCCCGGAC AGGCCGTCGA GATATTCTCC AAGGCGCTGC CGGTCGTGCC CACCGGGCAT
CGCGTCACCG CACAACCCGG CCGTCCCGAC GTCACGAGCG CAGAGGCCAC GATCGGCTCG
ATCCGCCAGG CTGTCCTCGA CGTCAAGGCC GGACGGGCGA GCGCCGTCGT GACCAATCCG
ATCGCCAAGG CCATCCTCTA CCGCGCCGGT TTTACGCACC CCGGGCACAC CGAGTATCTC
GCCGAGCTCG CCGCCGATGG CGGGGTGGTC CCGCAGCCCG TCATGATGCT GTGGTCGCCG
ACGCTCGCCG TCGTGCCGGT GACGATCCAT GTGGCGCTGC GCGAGGCGAT CGAGCAGCTG
ACGAGCCCGC TGATCACCTC CACGACCCGG ATCGTCGCGG CGAGCCTGCG GCGCTATTTC
GGCCTGTCGC GGCCACGCAT CGCCTTGTCG GGCCTCAATC CTCACGCCGG CGAGGACGGC
ACGATGGGCA CGGAGGAGGA CACGATCATC GCGCCGGCGA TCGCGACCCT GCGCAATGCC
GGCCTCGACG TGCAAGGACC GCTGCCGGCC GATACGATGT TCCATGACGC CGCGCGCAAG
ACCTATGATT GCGCCATCTG CATGTATCAC GATCAGGCGC TGATCCCGAT CAAGACGCTG
GCCTTCGACG AGGGCGTCAA TGTGACGCTC GGCCTGCCCT TCATCCGCAC CTCGCCGGAC
CACGGCACGG CCTTCGGCAT CGCCGGCAAG GGCACGGCCA ATCCGGCCAG CCTGATCGCT
GCCCTCCGGC TTGCCGCGCG CATGGCCAGC CAAGCGGCAT GA
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| Protein sequence | MSKPLALTLG EPAGIGPDIT LQAWLRRTEL GLPAFYLLGD PGFISQRATL LGLDVPVTET
HPGQAVEIFS KALPVVPTGH RVTAQPGRPD VTSAEATIGS IRQAVLDVKA GRASAVVTNP
IAKAILYRAG FTHPGHTEYL AELAADGGVV PQPVMMLWSP TLAVVPVTIH VALREAIEQL
TSPLITSTTR IVAASLRRYF GLSRPRIALS GLNPHAGEDG TMGTEEDTII APAIATLRNA
GLDVQGPLPA DTMFHDAARK TYDCAICMYH DQALIPIKTL AFDEGVNVTL GLPFIRTSPD
HGTAFGIAGK GTANPASLIA ALRLAARMAS QAA
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