| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3794 |
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| Symbol | |
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| ID | 5155849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3972700 |
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| End bp | 3974202 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558633 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_001239777 |
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| Protein GI | 148255192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.182489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGA TGTCGAAACG CAGCCGCTGG CTCATCCTTC TAACCGTCTC CAGCGCGCTC
GCGCTCGTCG TGATCGACAT GACGGTGCTC TATACGGCGC TGCCCAGCCT GACCTATGAG
CTCGGCGCAA CAGCGTCGGA GAAATTGTGG ATCGTCATGG CCTATGGCCT CGTCGTCGCC
GGTCTCCTTC CAGGCTTCGG CTCGCTCGGC GATCGCGTCG GCCACAAGAA GACATTCGTC
GCCGGGCTCA TCGTGTTCGG ACTGGCCTCT CTCGTCGCCG CCTATTCGCC GACCGCCATG
GTCCTGATCG GCGGCCGCGT CCTGCTCGCC ATCGGCGCGG CACTGATGAT GCCGGCGACG
CTGTCGATCA TTCGCATCAC CTTTTCCGAT GACCACGAAC GAGCGCTCGC CATCGCCATC
TGGGGTGCCG TCGCATCCAG CGGCGCGGCG GTCGGGCCCC TGGTCGGCGG CGTTCTGCTG
GAATATTTCT GGTGGGGCTC GGTGTTCCTG ATCAACGTGC CGCTGGTCGC CCTGGCGCTG
GTCGCCGGCC TGCTGCTGAT TCCGGCCCCG GCCGCTCGCG GCGAGCGCGA CTGGGACCTG
CTGGGTTCAA TCCAGGTGAT GGCCGGGCTG ATCGGGTTTG CCTATGTCGT CGAGGAGCTC
GGCAGCCGCC AGTCTTCCGT CGTCATTCTC GCCGGCGCGG CGATCGCGAC CGCCATCATG
TTGACGGTGT TCGTGCGCCG CCAATTGCGG CTCAAGGATC CCTTGCTCGA CTTCACCTTG
TTCAGAAACC TCGAGTTCAC GCTCGGCGTG ATCACCGCGA TCGTGGCGTC GCTTGCCATC
GCGGGCACCG AGCTGGCGAT CAGCCAGCGC CTGCAGCTCG TCCTTGGCTA TTCGCCGCTG
CAGGCGGCCT TGTACATCCT GCCGGCGCCG CTCGGGGCGT TCATCGGCGG GCCGCTCGCG
AGCCTGATGC TCCGTCGCGT CGGAGCCGCC ACCACGATGT CCGGCGCGCT CGCGATCTCA
AGCATCGGCG CGGCCGGCTA CCTGCTCTGC TACAATGCCG ATCTGGTGCT GCAATTGATC
TGCATCGCAA TCAACGGTCT CGGACTCGGC GCGTCCATGG CAGCCGCCTC CAACGCCGTG
ATGACTCACG CGCCCGAAGG CCGCGCAGGC ATGGCCGCCT CGATCGAGGA GGTGTCGTTC
GAGCTCGGCG GCACCATCGG CATCAGCATC TTCGGAAGCA TCCTGTCCGG GGTCTATACG
GCCGTCATGG TGCTGCCCGA CGGAGCGGGC GTTGCCAGCG CCGCGCGCGA CAGCATCGAT
GCGGCGCTGA TCGCGGCCGA GCGCCTGCCG ACCGACATCG CCGCAGTCGT CACGTCACAC
GCGCATCGCG CCTTCGATCA GGCGTTTCTG ACCGTCATCG TCGCGGCGAC GCTCGTCCTG
CTCGGCACTG CTTTGCTGGT GTGGCTCGGA ACGAGCCGGC TTCGTCTTCG CGCGGCCCTG
TAA
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| Protein sequence | MTPMSKRSRW LILLTVSSAL ALVVIDMTVL YTALPSLTYE LGATASEKLW IVMAYGLVVA
GLLPGFGSLG DRVGHKKTFV AGLIVFGLAS LVAAYSPTAM VLIGGRVLLA IGAALMMPAT
LSIIRITFSD DHERALAIAI WGAVASSGAA VGPLVGGVLL EYFWWGSVFL INVPLVALAL
VAGLLLIPAP AARGERDWDL LGSIQVMAGL IGFAYVVEEL GSRQSSVVIL AGAAIATAIM
LTVFVRRQLR LKDPLLDFTL FRNLEFTLGV ITAIVASLAI AGTELAISQR LQLVLGYSPL
QAALYILPAP LGAFIGGPLA SLMLRRVGAA TTMSGALAIS SIGAAGYLLC YNADLVLQLI
CIAINGLGLG ASMAAASNAV MTHAPEGRAG MAASIEEVSF ELGGTIGISI FGSILSGVYT
AVMVLPDGAG VASAARDSID AALIAAERLP TDIAAVVTSH AHRAFDQAFL TVIVAATLVL
LGTALLVWLG TSRLRLRAAL
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