Gene BBta_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3772 
Symbol 
ID5155948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3950775 
End bp3952370 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content68% 
IMG OID640558612 
Productputative O-succinylbenzoate--CoA ligase 
Protein accessionYP_001239756 
Protein GI148255171 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.910601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGGT CGCAGCATGC CGAGATCAAG CCGATGCGGT GTGAGCAGCG CTTCGGCGAC 
CGCGTGGTGC CGCTGTTCAC GGACCGTCCG CCGACCATCT GGGCCATGGT CGAAGCGGCG
GTCGCGCGCA ACGGCGATGG CGAGGCGCTG GTCTGCGGCG CCGTGCGGCT GTCATGGCGG
CAGGTGGCCG ACGCTGCGGC GCGGATCGCG TCGGGTTTGC ACGCCAAGGG CCTGCGCCGC
GGCGATCGGC TGGCCCTGCT GCTCGGCAAC CGCATCGAAT TCGTGCTCAC GCTGCTGGCC
GCGGCCAAGC TCGGTCTCGT GACGGTGTTG CTGTCGACGC GGCAGCAGAC GCCGGAGATT
GCCTATGTGC TGAACGATTG CGGCGCCCGG CTGCTGCTGC ACGAGGCTGC GCTCGCAGGC
CGGCTGCCGG CCGGCGACGT GACGCCCGAG CTCGCCGGGC GGATCGCGGT CGATGACGAC
CCGGCGCGCT CCGGCTTCGC CGCGCTGACC GATCAGCCGG TCCATACCGA TCGGGTCGAG
ATCGCCGAAG AGGACACTGC GATGATCCTC TACACGTCCG GCACCACGGG GCGGCCCAAG
GGCGCGATGC TCGCCCATTG CAACATCGTG CATTCCTCGA TGATCTACGA GGCCTGCCTG
GGGCTCACGG CCGCCGACCG TTCGATCGCA GCCGTTCCGC TCGGCCATGT CACCGGCGTG
GTGGCCAACA TCACCAGCAT GGTGCGTTGC GCCGGCACCT TGATCATCAT GCCGGAGTTC
AAGGCCGGCG ACTATCTCAA GCTCGCGGCG CGCGAGCGGG TGACCTACAC GGTGATGGTC
CCCGCAATGT ATAATCTGTG CCTGCTGCAG CCCGACTTCG ACAGCCATGA TCTGTCGTCC
TGGCGCATCG GTGGCTTCGG CGGCGCGCCG ATGCCGGTCG CCACCATCGA GCGCCTCGCC
GCCAAGATTC CCGGGCTCCG GCTGGTGAAC GCCTACGGCT CCACCGAGAC CACCTCGCCT
TCGACCTTGA TGCCGTCGGT TCTCACGGCC CGCCACCTCG ACAGCGTCGG CCTGCCTTGT
CCGGGCGCCA GCATCCTGGT GATGGACGCC GACGGGCGGG AGTTGCCGCG CGGCGAGATC
GGCGAGATCT GGATCGGCGG CGGCCAGGTC ATCAAGGGCT ATTGGAACCG GCCCGACGCC
ACTGCAGAAA GCTTCACCGC CGGCTACTGG CATTCCGGCG ACCTCGGCTC GATCGATGCT
GACAATTTCG TCCGGGTGTT CGACCGGCAG AAGGACATGA TCAACCGCGG GGGGCTCAAG
ATCTATTCGG CGGAGGTCGA ATCGGTGCTG GCGAGCCACC CGGCAGTGGT CGAAAGCGCG
ATCATCGCCC GGCCATGTCC GGTGCTCGGT GAACGGGTCC ATGCCGTCGT GGTTACCCGC
GAGCCCACCA GCAGCGAGAC CCTGCGCAGC TGGTGCGCCG AGCGGCTGTC GGACTATAAG
GTGCCCGAGA CCCTCATCGT GACCCCGGAC CCTTTGCCGC GCAACGCGAA CGGCAAGGTG
ATGAAACGGC AGTTGCGCGA GGCCTTGACG GCGTGA
 
Protein sequence
MQWSQHAEIK PMRCEQRFGD RVVPLFTDRP PTIWAMVEAA VARNGDGEAL VCGAVRLSWR 
QVADAAARIA SGLHAKGLRR GDRLALLLGN RIEFVLTLLA AAKLGLVTVL LSTRQQTPEI
AYVLNDCGAR LLLHEAALAG RLPAGDVTPE LAGRIAVDDD PARSGFAALT DQPVHTDRVE
IAEEDTAMIL YTSGTTGRPK GAMLAHCNIV HSSMIYEACL GLTAADRSIA AVPLGHVTGV
VANITSMVRC AGTLIIMPEF KAGDYLKLAA RERVTYTVMV PAMYNLCLLQ PDFDSHDLSS
WRIGGFGGAP MPVATIERLA AKIPGLRLVN AYGSTETTSP STLMPSVLTA RHLDSVGLPC
PGASILVMDA DGRELPRGEI GEIWIGGGQV IKGYWNRPDA TAESFTAGYW HSGDLGSIDA
DNFVRVFDRQ KDMINRGGLK IYSAEVESVL ASHPAVVESA IIARPCPVLG ERVHAVVVTR
EPTSSETLRS WCAERLSDYK VPETLIVTPD PLPRNANGKV MKRQLREALT A