| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3681 |
|---|
| Symbol | |
|---|
| ID | 5155735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3844344 |
|---|
| End bp | 3845444 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640558521 |
|---|
| Product | putative membrane protein of unknown function with YeeE/YedE motives |
|---|
| Protein accession | YP_001239667 |
|---|
| Protein GI | 148255082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.241689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCACCG CATTGATCGA TCGTCTGGGT GAGGAGCCGG TGCTGCTGCT GTGCGGGCTC
GCGGTCGGCG GTGCCTTCGG CTTCTTCGCC CAGCGCAGCC GCTTCTGTCT GCGGGCCGCG
ACGATCGAGT TCGCGCGCGG GCAGGGCGGG CCGCGCCTCG CCGTCTGGCT CCTGACCTTT
GCCTCGGCGC TGCTCGGCAC CCAGTCGCTG GTGGCCATGG GCCTGCTCGA TGTTTCGGAA
GCGCGTCAGC TGGCGCAGCA GGGCAGCATC TCCGGGGCGA TGATCGGCGG CACCCTGTTC
GGCTGCGGCA TGATCCTGGC GCGCGGCTGT GCCAGCCGTC TCTTGGTGCT CTCCGCGAAT
GGCAATCTGC GAGCCTTGCT GTCGGGCCTG ATCTTCGCGG TGACGGCGCA GTCGGCCTAT
CACGGTCTGC TTGCGCCGTT GCGTGAGTGG CTCACCAATC TCTGGCTCGT CGATGGCGGA
CCGTCGCGCG ACATCATGAG CGTGCTGGGC GGCGGTACGC CCGAGAAGCT CGGCTTCGGC
ATGCTGTGGT TCTTGGCCGG GCTCGCCGCC GTGTCCAAAT TCCAGGTCGG AGGTCGGATC
CTGTACTCGG CGGTGGCCAC GGGTGCTGCC GTCGCAGCCG GCTGGCTGCT GACCTATCAG
CTCGGCCAGG CGTCGTTTGC GCCGGTGCCG CTGAAGAGCC TGACCTTCAG CGGGCCCTCG
GCGGAGTTCT TGATGCAAGT GCTCGCCAGC CCCCAGCTGA AGCCCGGCTT CGACCTCGGC
ATCATCCCGG GCGTGTTCAT CGGCTCGTTC GTCGCGGCGG CGCTGGCGGG CGAGCTCAAT
CTGGAAGGCT TTTCGGACGG GCGCGGCATG CGGCGCTATC TGGTCGGCGC CGTCCTCATG
GGATTCGGAG CGATGCTGGC CGGCGGGTGC GCCGTCGGGG CCGGCGTGAC CGGGGCATCG
GTGTTCGCGC TGACAGCATG GATTGTGCTC GGCGGCATGT GGCTCGGCGC AGCCGCCACC
GATTTCGTCG TGGACCGCTG GCTGTTCGCC GCCAAGCCGA TGCACGACGC TGCACAGCCG
ACCGCTACGA TATCCTCATA A
|
|---|
| Protein sequence | MLTALIDRLG EEPVLLLCGL AVGGAFGFFA QRSRFCLRAA TIEFARGQGG PRLAVWLLTF
ASALLGTQSL VAMGLLDVSE ARQLAQQGSI SGAMIGGTLF GCGMILARGC ASRLLVLSAN
GNLRALLSGL IFAVTAQSAY HGLLAPLREW LTNLWLVDGG PSRDIMSVLG GGTPEKLGFG
MLWFLAGLAA VSKFQVGGRI LYSAVATGAA VAAGWLLTYQ LGQASFAPVP LKSLTFSGPS
AEFLMQVLAS PQLKPGFDLG IIPGVFIGSF VAAALAGELN LEGFSDGRGM RRYLVGAVLM
GFGAMLAGGC AVGAGVTGAS VFALTAWIVL GGMWLGAAAT DFVVDRWLFA AKPMHDAAQP
TATISS
|
|---|
| |