Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3587 |
Symbol | |
ID | 5151957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3747520 |
End bp | 3750888 |
Gene Length | 3369 bp |
Protein Length | 1122 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558437 |
Product | hypothetical protein |
Protein accession | YP_001239583 |
Protein GI | 148254998 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.479804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0414977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTGC TGCTGGAGGC CGCACTGCGA TCGTTTGGCC TCGGGGCGGC AGTCTGGATC GGTCTGCGGC TGGTCAGAGT CGTCAATCCG CGGATCGAGT TGCGGGTGTG GGTCTGCGTG ATGCTGGCCT CGACCGCGAT GCCTGCGCTG GTCGGGTCGA GTCTGGTCAC GCTCACGCTG CACGAAGATC CTCCCGCGGC GGCGATCCCG CTGCCAGGCG CGCCGGACGA GCAGCCAATG GCCCGTAGTT TGCGGTCGGG CTCGGCCGGC GCCGCGCGCG TTGCCGCGGC TGTCGATCAA AGCGGTTCGG CTCGCGAAAT CGGCCAGGCC GACACCAACC GCGGTGTGGG TGCCGCGACG TCCTCGTCGT CTGCCGCGCC GGGCGTCGGC GCGCAACTCT CTGCTTGGCG TCCGAACTGG CGCGGACTTG TCTTCTATCT CTATGTCACT GTGGCCGCCG TGCTGCTGCT GCGGATCAGT CTGGGCATTC TGTTCGCGGT CAGGCTGTGG CGGTCGGCGG AGATCGTTCA TGAGCCGCTT GCCGGCGGCG ATGTGCGCGT CAGCCCCGCC GTCAGATCGC CGGTGACGTT TGCCGGCAGC GTCCTGCTGC CTTTGGAATA CCGCGACTGG GAGCCCGTCA AACTAATCGC GGTGCTCGGG CACGAGCATT CCCATGTCCG CCATCTGGAT TTCTACACGC TGTTGTTTGC GACCTTGCAC CGCGCGGTGT TCTGGATCAA TCCGCTCGCC TGGTATCTCT GCTACAGGGT CGCGGCCTTG GCAGAGATGC GAAGCGACGA CGAGGCGATC GAAGGCATCG GCGATCGCCT GGCCTATGCG GAAGTGCTGC TCGGGGTGGC CAGCAACCCG GCGCCGCCAC CTCATGGCAT GGTCGCCCTG ATGCATGCGA TCGTTGCCCA ACGGATCGAG CGGATCCTGG ATTCCGACTG CGTTTCGGAA CGGCCCGCAT TGCGCAAACG CATCGCCATT TATGGCGCCT GTTGCACCCT CATTCTGCTG AGTGCAGGCA GGATCGGCTA CGGCTATCTG CCGCTGGACG TCAGCTGGGA CGAGTTCACG GCCCGCAGGA CCTCGGGGGC CGTGCGGGCC GTGATGGTCC CCCCCGAGCA GCTCGACAGC TATGTCGGCT ACTATCAGGC CGATCCGGCG GTCCTGCCCG ACCTGGTGTT GACCGTGACG CGCGACAAGC AGCATCTGTT CGTGCAACGT ACCGGCCAGA ACAAGATCGA AGTGCTGCCG GAGAGCGAAC GCGATTTCTT CTACACCGAT CGAAGCTTCG AACTGTCCTT CATCGGCCGG GCGGGGGCGC GCGCCATTGC CATGGTACTG CATCAGAACG GCACGCATAT CCGTGCGTCG CGGGTCTCGG CGGACGTCGC CCGCCGTGCG GCCGACCTGC TCGAGCAGCG TCTCATTGAA CAGGCGCGAA CGCGCAGTCC AGCCAGGATT GACCCGGCTG CCTTCGACCG CCTGGTCGGA TATTATCGTG AGAATCCGCG GCTCCACGTC GAAATCAGCC GAGATGGCGA TCGGCTGTTC GGCCGATACA GCGGCAGCCG CAAAATGGAG CTGTTTGCCG AAGACGATCT GCACTTCTTC TTCAAGGATA TTGATGCACA GATCGCCTTC TTCGCCGATG CCGATGGACA CGTCAATGCG CTGACCAGTC ACCAGGACGG CCGTCTGTGG CCTGCCCAGC GGATAGCCGC ACCGGACCGA ACCGTGGGCC AGGTCGAGGA CGCTGCCGCG TCGCGGAATC CGGGTATCGC TCCCGAGCAG GCCGTCATTC TCCGTGAGCC GCGATCGGCC GAGACGATCG CAGGATTCTA CCAGGTCGAT TCGTTCAAGA TCCTGGTCAT TTCCGCAGAG AACGGCAGGA GTTTCGCGCA GCTCGGCTAT CAGCCGAAGG TCGAGATTGA GGCGGCCCGC GACGGCTCAT ATGGCGATGT CGGCATGTCG CTCAGGCTTC GCTTCACGTT GGATGATGCG GGCAAAGTCT CGGGCGCGAT GCTCATTCGC AAGGGCAAGA CGACGCGGCT ACCGCGCATC AGTGGTTTGC CGCAGTTTGC ACCGCAGGCC TCTCGGCTCG ATGCGCGGCT GTTCGATGCC GAATACGCCG GAAACTACCA GGCGGGGTTC GATACTTTGA TCCGAATTAC CAGAGAGGGA GACCGCCTCC GCGTCGAAAA GCCTGGTCTG GTGACCGGAG ATGAGATCGA ACCTGTCGCC GATCGAGTGT TCCTGTGCCG GGCGACCGGC AAGCATTTTC TGTTCATTCG GGATCCCTCG GCAAGCGCGC TGAACCTCGT GATCTTCGAG CCGGGTGTCG GTGCAACGTT GGCCACACGG ATCGATGGCG CAACGGCGCG AGAGCTCGAA GTGGAGCATA TTCGTCGGAC CGCGATGAGG ATCGACCGCG TTCTGGCTCA GACGGCGACG GCCGGCAGTG AGGAGATCCT GCGTGATACG ATCGCGCAGT TGCAGCGCGG CGAGGTCGAC TCGACGCAGC TGAAACAGAG ATTTCCGCAG GAGCTTCGGG TCAGGCTGCT CAAGGCCAAG CGTGAGCTGC AGGCACTCGG CGTGCTTCAG CAGCTTCGGT TTGCCGGAGT CGCGGCGGAC GGGCTGGACG TCTTCGATGC CCAGTTTGCG TGGGGGAGTG CCCGATTCAG AGTGCTCTTG GACAGCGACC GGACCGTGAA GCGGCTGGCC TTTCGCTGGT ACGGAGACGA CACGCCGGGG GCCTATGTGC CCTGCGGAGC TGAAATCCCC GCCGGCGAGC CCGCCGGAGC GCTGTCGATC GACGTGACCC TGATCAATCA CAGCGAAGGA CCCGTCAACG CCTACCTGGT CGGGCCGGAT GGCGAGCGCA GATTTCAAAG CAGTTTCGAG CCGGACACGC GTGGCGAGGT CGCGACGAAA CTCGATCGGC CGATCGTCAT CACCGACAAG GCTGGCGATT GCATCGGAAT CGTTCTTCCA GGCAGGGCGA CCCGTGTCAC CGAGGTGCGG GGAAGCGAGA ATGGCGCTGT CCTCGGCGCG CCCCTGATCC ATGACACACC GGATCCGCAG AGCCAGACGC GGCTGCTGGA CTACATGGCC GCAGTGCGCG ACGGTCGGAT CGACGAGACG ATGCTGACCC GGTCGATGGC GCGCAATGGA CGCGAGAGGC TCGCCGTTTG GCAGCGCATG TTGACCGATC TCGGCCGGTT CGAGTCGCTT CGCTTTATCG GTGGAGATAG TGCCGTCGGC GATCGGTTCC GCGCGCGCTT CAGCAACGGC GAACTCGATT GGCGGATCGT CACCGCCGCA GACGGACGCA TTTCCAGCCT CGCTGTCGGC GCTGACTAG
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Protein sequence | MDLLLEAALR SFGLGAAVWI GLRLVRVVNP RIELRVWVCV MLASTAMPAL VGSSLVTLTL HEDPPAAAIP LPGAPDEQPM ARSLRSGSAG AARVAAAVDQ SGSAREIGQA DTNRGVGAAT SSSSAAPGVG AQLSAWRPNW RGLVFYLYVT VAAVLLLRIS LGILFAVRLW RSAEIVHEPL AGGDVRVSPA VRSPVTFAGS VLLPLEYRDW EPVKLIAVLG HEHSHVRHLD FYTLLFATLH RAVFWINPLA WYLCYRVAAL AEMRSDDEAI EGIGDRLAYA EVLLGVASNP APPPHGMVAL MHAIVAQRIE RILDSDCVSE RPALRKRIAI YGACCTLILL SAGRIGYGYL PLDVSWDEFT ARRTSGAVRA VMVPPEQLDS YVGYYQADPA VLPDLVLTVT RDKQHLFVQR TGQNKIEVLP ESERDFFYTD RSFELSFIGR AGARAIAMVL HQNGTHIRAS RVSADVARRA ADLLEQRLIE QARTRSPARI DPAAFDRLVG YYRENPRLHV EISRDGDRLF GRYSGSRKME LFAEDDLHFF FKDIDAQIAF FADADGHVNA LTSHQDGRLW PAQRIAAPDR TVGQVEDAAA SRNPGIAPEQ AVILREPRSA ETIAGFYQVD SFKILVISAE NGRSFAQLGY QPKVEIEAAR DGSYGDVGMS LRLRFTLDDA GKVSGAMLIR KGKTTRLPRI SGLPQFAPQA SRLDARLFDA EYAGNYQAGF DTLIRITREG DRLRVEKPGL VTGDEIEPVA DRVFLCRATG KHFLFIRDPS ASALNLVIFE PGVGATLATR IDGATARELE VEHIRRTAMR IDRVLAQTAT AGSEEILRDT IAQLQRGEVD STQLKQRFPQ ELRVRLLKAK RELQALGVLQ QLRFAGVAAD GLDVFDAQFA WGSARFRVLL DSDRTVKRLA FRWYGDDTPG AYVPCGAEIP AGEPAGALSI DVTLINHSEG PVNAYLVGPD GERRFQSSFE PDTRGEVATK LDRPIVITDK AGDCIGIVLP GRATRVTEVR GSENGAVLGA PLIHDTPDPQ SQTRLLDYMA AVRDGRIDET MLTRSMARNG RERLAVWQRM LTDLGRFESL RFIGGDSAVG DRFRARFSNG ELDWRIVTAA DGRISSLAVG AD
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