Gene BBta_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3563 
Symbol 
ID5151678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3720403 
End bp3722160 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content69% 
IMG OID640558415 
Productputative potassium efflux transporter (ybaL) 
Protein accessionYP_001239561 
Protein GI148254976 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component
[COG4651] Kef-type K+ transport system, predicted NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAAG TCGAGATGCC GCACGAAACA CCTCTCATTG CGACCATCGT CGCCGGCCTT 
GGATTGGCCT TCGTCTTCGG AGCCCTTGCG CAGCGGTTCC GGTTCCCGCC GCTGGTCGGC
TATCTCCTGG CCGGCGTCGC CGTCGGCCCG TTCACGCCGG GCTTCGTCGC CGACCAGGCG
TTGGCGACCG AGCTCGCCGA GCTCGGCATC ATCCTCTTGA TGTTCGGTGT CGGCCTGCAT
TTCTCGCTGA AGGATCTGAT GTCAGTGCGC GCCATCGCCG TGCCCGGCGC GATCGTGCAG
ATCACGGTGG CGACCCTGAT GGGGATGGCT TTGAGCTGGG CGATGGGATG GTCGCTCGGC
GGCGGCCTCG TCTTCGGCCT CGCGCTTTCG GTCGCCAGCA CGGTGGTGCT GCTGCGCGCG
CTGCAGGAGC GGCGGCTGAT GGACACCGAG CGCGGCCGCA TCGCAGTCGG CTGGCTGATC
GTCGAGGACC TCGCGATGGT GCTGGCGCTG GTGCTGATCC CGGCCTTCGC CAGCCTGCAG
AATGGCGACG GCGCGGCGGT CGCGGCCGAT CCGCTGGCGG CACGCTTCGG CCTCGGGCTC
ACGGGCGTGC TGCTGCTGAC CTTCGTCAAG ATCGGCGTGT TCATGGCGCT GATGCTCGTG
GTCGGCCGCC GGCTGATCCC GTGGATCCTG CACTACATTG CCCATACCGG CTCGCGCGAG
CTGTTTCGGC TGGCGGTGCT CGCGATCGCG CTCGGCGTCG CCTTCGGCTC GACCAAGCTG
TTCGGGGTGT CGCTGGCGCT CGGCGCCTTC TTCGCCGGCA TGATGCTCGG CGAGTCGCCG
CTGAGCCAGC GCGCCGCACA GGAATCGCTG CCGCTGCGCG ATGCCTTCGC GGTGCTGTTC
TTCGTCTCGG CGGGCATGCT GTTCGATCCC GCCAGCATCA TCCGCGAGCC CTGGCCGCTG
CTTGCGACCC TTTTCATCAT CCTGTTCGGC AAGTCGCTCG CCGCGTTCCT GATCGTGGTC
GCGTTCCGGC ATCCGGTCTC GACCGCGCTC ACCATTTCCG CCAGTCTTGC CCAGATCGGC
GAGTTCTCCT TCATCCTCGC CGAGATCGGC GGCGCCACGA ACCTGCTGCC GAAGGCCGGC
CGCGACCTGA TCCTGGCCGG TGCCATCATC TCGATCATGC TCAATCCGCT GCTGTTCGCG
GGCCTCGACT GGCTGCTGCC GCGGCTGGAG CGCCGCCGCA ATGATCCAGC CACGCCGGCG
GCGGCGCCGC CGGCCGAGAT CCCGGCGACC GCGCTCACCG AGCACACGAT CATCGTCGGC
TATGGCCGCG TCGGCCGGCT GGTCGGCGAG GCCCTCCGGC AGCGCGGCCA CGCTTTGCTG
GCCGTGGAGA CGTCGGACGA CATCCTCAAG CCATTGAAGG ACGAGGGCGT CGAGACCATC
ACGGGCAATG CCGCGGCCAG CCACGTGCTG CGCGCAACCA ATCCAGCCGG CGCCCATGCG
CTCGTCATCG CCATCCCCGA GGCGTTCGAG GCCGGGCAGA TCGTCGAGCA GGCGCGCGCC
GCCAACCCCG CGCTGCACAT CGTGGCGCGG GCGCATTCCG ACGCCGAGGT CGAGCATCTC
AAGTCGCTCG GCGCCGACGT CGTCATCATG GGCGAGCGCG AGATCGCACG CGGCATGATC
GAGGAGCTGG GCACCAGGCC GCCCGACGCC GCGCCCGCGC TGGTGCCGCA CCGGCCGGCG
GAGCAGGTGC AGGTGTGA
 
Protein sequence
MQQVEMPHET PLIATIVAGL GLAFVFGALA QRFRFPPLVG YLLAGVAVGP FTPGFVADQA 
LATELAELGI ILLMFGVGLH FSLKDLMSVR AIAVPGAIVQ ITVATLMGMA LSWAMGWSLG
GGLVFGLALS VASTVVLLRA LQERRLMDTE RGRIAVGWLI VEDLAMVLAL VLIPAFASLQ
NGDGAAVAAD PLAARFGLGL TGVLLLTFVK IGVFMALMLV VGRRLIPWIL HYIAHTGSRE
LFRLAVLAIA LGVAFGSTKL FGVSLALGAF FAGMMLGESP LSQRAAQESL PLRDAFAVLF
FVSAGMLFDP ASIIREPWPL LATLFIILFG KSLAAFLIVV AFRHPVSTAL TISASLAQIG
EFSFILAEIG GATNLLPKAG RDLILAGAII SIMLNPLLFA GLDWLLPRLE RRRNDPATPA
AAPPAEIPAT ALTEHTIIVG YGRVGRLVGE ALRQRGHALL AVETSDDILK PLKDEGVETI
TGNAAASHVL RATNPAGAHA LVIAIPEAFE AGQIVEQARA ANPALHIVAR AHSDAEVEHL
KSLGADVVIM GEREIARGMI EELGTRPPDA APALVPHRPA EQVQV