| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3404 |
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| Symbol | |
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| ID | 5152970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3552920 |
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| End bp | 3553831 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558261 |
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| Product | putative RNA polymerase sigma subunit |
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| Protein accession | YP_001239408 |
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| Protein GI | 148254823 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.398842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGATG GCACGCTGCG CCGCGCGCCC AGGACCGAGC TGATGGCCCT GGCAGAGGGA
CTCCGGCCCG AGCTGCATCG CTATTGCGCG CGCCTGATGG GCTCGGTGGT CGACGGCGAG
GACGTGGTGC AGGACACTCT GGCGAAGGCT CTGGTGGCGG TGGACGATAT AAAGGAGATC
ACGATGCTGC GCAGCTGGCT GTTCCGCATC GCGCATAATC GCGCACTGGA CCTGCTGAGA
AGCCGCGCGA TCCGGGCTGC CGAACCGATC GAAGCGGCCG ACGACATCGC CGATGACGCC
GCAGCCGACT CTTTGGAGCG CATGATGCGC GACGAGGCGA TCAGGACGGC CGTCTCGCGT
TTCGCGCAGC TTCCGATCCC TCAGCGGAGC ATTCTGATCT TGAAGGATGT CCTCGACGAG
CCGCTCGCCG ACATCGCGGC TCTGCTTGAT CTCACGGTCG ACTCGGTGAA GGCCCATCTC
GCCCGCGCCC GCGCGCGGCT CTCGGAGATC AACGCCAAGG CGGGGGCGCG GCCCGCGGCG
CAAGTGACGT CCGAGCTCGT GGCCCAGTAT GTGACCCTGT TCAACCAGCG AGACTGGGAT
GGCCTGCGCG CGCTGCTGGC CCACGACGTC AAACTGCAGC AGTCCGGTCA TCCCATCCGG
ATCGGCTCGG CTGATGTCGG CATGTTCTTC GGCATCTATG CCGGGGTCGG GGGCGTGTGG
CTGGCGCCCG CCTGGCTCGA GGGCCGGGAG GTGATCGCCG TGTTCGAACG CAGCGATGAT
CAGACGCCCG GCTACGTCAT GTGGCTCGAC TGGCGCGACG GCAAGATCAG TTACATCCGC
GACTATCGCT ACGTCCGCTA TGTCATCGCC GACGCCGAGC TGGTGCTCGG ACCGCTTGCT
CACATAGCTT GA
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| Protein sequence | MSDGTLRRAP RTELMALAEG LRPELHRYCA RLMGSVVDGE DVVQDTLAKA LVAVDDIKEI
TMLRSWLFRI AHNRALDLLR SRAIRAAEPI EAADDIADDA AADSLERMMR DEAIRTAVSR
FAQLPIPQRS ILILKDVLDE PLADIAALLD LTVDSVKAHL ARARARLSEI NAKAGARPAA
QVTSELVAQY VTLFNQRDWD GLRALLAHDV KLQQSGHPIR IGSADVGMFF GIYAGVGGVW
LAPAWLEGRE VIAVFERSDD QTPGYVMWLD WRDGKISYIR DYRYVRYVIA DAELVLGPLA
HIA
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