Gene BBta_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3395 
Symbol 
ID5155982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3546572 
End bp3547054 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID640558253 
Producthypothetical protein 
Protein accessionYP_001239400 
Protein GI148254815 
COG category[S] Function unknown 
COG ID[COG3439] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.614366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGAC ACCTTCGGGC AATGATCGTC AGTGCGAGCC TTGCCGTCGG CTGCGGGGCT 
CCGCTTGCGC ACGCACAATC GACAGCAGCC CAGGCGGGCC TCGTCACCGT CCCGAGCGCC
AACACGATGG CCGAGACGGA AAAGCGGCTC ACCGATGCAC TGGACGCCGC CGGGCTGAAG
GTCGCGGCCC GCATCGATCA TTCTGCCGGT GCCAAGGCAG CCGGTCTCGA GCTTGCCCCA
ACGGTCGTCT ACATCTTTGG AAATCCCAAG GTCGGCACCG TTCTCATGCA GGCCAAACGC
ACATCGGGGA TCGACCTGCC GTTGAAGATC CTGGTTTGGG AGGAGGCTGG AACAGTCAAT
CTGACCTACA CCGATCCTGC CGAGATCGCG CGTCGGCACG GCATCGATGC CGATCTTCCG
GTGCTATCCC AGATGAGCGC GGCCATGAAG CGCATCACGG CTTCCGCCTC CACCAAGCCG
TAG
 
Protein sequence
MIRHLRAMIV SASLAVGCGA PLAHAQSTAA QAGLVTVPSA NTMAETEKRL TDALDAAGLK 
VAARIDHSAG AKAAGLELAP TVVYIFGNPK VGTVLMQAKR TSGIDLPLKI LVWEEAGTVN
LTYTDPAEIA RRHGIDADLP VLSQMSAAMK RITASASTKP