Gene BBta_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3392 
Symbol 
ID5154479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3544374 
End bp3545276 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID640558250 
Producthypothetical protein 
Protein accessionYP_001239397 
Protein GI148254812 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC ACGCGTTGCC GTGCAATTGT CCTGACGCCA TCCCCGCGCG CGCAGGGGTC 
GGATTGAAGC CGTCTCACTA CCAGGAGATT CTCGGGACCC GACCGTCGGT CGGGTTTTTC
GAGGTTCACG CCGAGAACTA CATGGGAGCG GGCGGGCCTC CGCACCGCTT CCTCGAGGCG
ATCAGGTCGC ACTATCCGCT ATCCCTGCAC GGCGTCGGAC TTTCCATCGG TGGCAGGAAT
CCGCTCGACG AGGATCACCT GCTGCGTCTG AGGAAATTGA TCGATCGATA CCAGCCTGGC
CTATTCTCCG AGCACCTGGC CTGGTCGAGC CACGAAACTG GCTATTTCAA CGACCTGCTG
CCCTTGCCCT ACACGCCGCA AACGCTCGCG CGAGTGTGCG AGCACATCGA TCGGACGCAA
TCCGCGTTGC GGTGCCGGAT GCTGCTCGAA AATCCGGCCA CCTACGTCAC CTTCGCGGCG
AGCACAATCC CGGAGGTCGA TTTCCTCGCC GAGGTTGCGA GACGGACCGG CTGCGGGCTC
CTGCTCGACG TCAACAACGT CGTGGTGTCG GCGACCAATC ATGGCTTCGA CGCGGTCGCA
TATCTGAATG CGTTTCCTCT GTCGGTGGTG AACGAGATCC ACCTCGCAGG TCATGCGGAG
GCCCGGGACG ATCTCGGCCA GCCCATGCTG ATCGATGCGC ACGGAACGCC CGTCTGCGCA
ACGGTCTGGC AGCTCTATGC CGCTGTTCTC GGTCGGACCG GCCGGCAGCC GACCCTGATC
GAGTGGGATA ACGACGTGCC GGCGTGGCAC GTGCTGATGC GCGAGGCCGA ATCCGCCGAG
CATCTGCTCT GCAATGTCGC GGCCGTTGGA GAGCCTTTGC GGAGACACGA AGATGCCGCC
TGA
 
Protein sequence
MIGHALPCNC PDAIPARAGV GLKPSHYQEI LGTRPSVGFF EVHAENYMGA GGPPHRFLEA 
IRSHYPLSLH GVGLSIGGRN PLDEDHLLRL RKLIDRYQPG LFSEHLAWSS HETGYFNDLL
PLPYTPQTLA RVCEHIDRTQ SALRCRMLLE NPATYVTFAA STIPEVDFLA EVARRTGCGL
LLDVNNVVVS ATNHGFDAVA YLNAFPLSVV NEIHLAGHAE ARDDLGQPML IDAHGTPVCA
TVWQLYAAVL GRTGRQPTLI EWDNDVPAWH VLMREAESAE HLLCNVAAVG EPLRRHEDAA