Gene BBta_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3355 
Symbol 
ID5154266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3509626 
End bp3510888 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content63% 
IMG OID640558214 
Producthypothetical protein 
Protein accessionYP_001239361 
Protein GI148254776 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.40936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.967492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGT GGCAGCTGAC CCTCAGGGTG TTTCTGCCAT TCGTGGGCGC CTACTATCTG 
TCGTTTCTGT TCCGAACCAT CAATGCGACG ATCGCAGGCT CGCTCGCCAC CGAATTCGGC
CTCAGCGCCG GCAATCTCGG TCTGTTGACG TCGGTCTACT TCCTGACCTT CGCTGTAGCC
CAGATCCCGA TTGGCATTCT CCTGGATCGA TATGGTCCGC GGCTCGTTCA GAGTGCGGTG
CTGTTAGCCG CGGCCGCTGG CGCGGCGCTG TTTGCGGTCT CGGATCACTT CCTGCTCCTC
CTTGCCGGCC GCGCCCTGAT CGGCCTCGGC GTCGCCGCCG CAATGACGTC CGGCCTGAAG
GCACTGTTGC TCTGGTTTCC GGGCGAGCGG GTGCCGTTGC TCAATGGCAT CATGATCATG
ATAGCAGCCT CGGGAGCGGT CACTGCGACG CTGCCGGCGG ACTGGCTGGT CGCCTCGATC
GGCTGGCGCG GATTGTTCAA TCTTCTCGCG TTCGGATCCC TTGGCTGCTC GCTGCTGATC
TTTCTGATCG TGCCGAAGGT CGTGCCGGCA TCGCCATCTG CTTCAGGTGC GGCCAAGATC
GGCCTGAAGA CCATTTACGC TGACCCCCGC TTCTGGCGGC TAGCGCCGCT TTCGGCCACC
TGCATCGGAA CCGCCTGGTC GCTCCAGGGG CTTTGGGCTG CATCATGGTT CAATGATGTC
GAAAGCCTCG GCCGGCCGGC ATTGCTGCAG AACCTCTTGA TGATGGCGAT TGCCTTGAGC
GTTGGCGCGC TCCTGCTCGG CGTCGTCGCC GATCGGTTGC GTCGTCGGGG CATCGGGCCT
GGTCAGTTGC TGTCGTCCGT TGCGATCCTA TTCATCGCCG CGCAATCGGC GCTGATCGCG
CGCCTGCCGC TACCATCGTG CATCTCCTGG GTCTTCATTG CGTCCGTCGG TGCGGCGACC
GTGCTGAGCT ACGCCGTCTT GGCAGAGTAC TTCCCGAAGG AGGTCGCTGG ACGGGCCAAT
GCGGCGCTCA ACGTGTTCCA CATCGGAGGC GCGTTCGCCT TGCAATGCTT GACGGGACTC
GTGGTGCAGC TCTGGCCGGC GGTCGGCGGT CACTATCCAG CAATCGCGTA CCAGGCAGCT
TTCGGCGTGA ACGTCGCTCT CCAGATCTCG GCTGCGATCT GGTTCACGCT TCCGTCCCGA
GCGAGCGCTG AGAGCCGGGA GGAGTACCAA CAATTCGTTG AGCGGGATCT GCGGCGTGCT
TGA
 
Protein sequence
MSMWQLTLRV FLPFVGAYYL SFLFRTINAT IAGSLATEFG LSAGNLGLLT SVYFLTFAVA 
QIPIGILLDR YGPRLVQSAV LLAAAAGAAL FAVSDHFLLL LAGRALIGLG VAAAMTSGLK
ALLLWFPGER VPLLNGIMIM IAASGAVTAT LPADWLVASI GWRGLFNLLA FGSLGCSLLI
FLIVPKVVPA SPSASGAAKI GLKTIYADPR FWRLAPLSAT CIGTAWSLQG LWAASWFNDV
ESLGRPALLQ NLLMMAIALS VGALLLGVVA DRLRRRGIGP GQLLSSVAIL FIAAQSALIA
RLPLPSCISW VFIASVGAAT VLSYAVLAEY FPKEVAGRAN AALNVFHIGG AFALQCLTGL
VVQLWPAVGG HYPAIAYQAA FGVNVALQIS AAIWFTLPSR ASAESREEYQ QFVERDLRRA