Gene BBta_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3292 
SymbolntaA 
ID5148818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3447170 
End bp3448513 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content66% 
IMG OID640558155 
Productnitrilotriacetate monooxygenase component A 
Protein accessionYP_001239302 
Protein GI148254717 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.451548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.084467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC GTCGCCAACT GAACCTCAAC CTCTTCATCT ATCCCGGCGG CCATCACGAG 
GCGGCATGGC GCTACAAGGG CTCGGCGGCG AGCCGGGCGC TCGATATCAG CTATTACCAG
CAGCTGGCGC GCACGGCCGA GCACTATACG TTCGACGCGA TCTTCTTCGC CGACGGTCCG
GCATTGGCCG ATAATGTCCG CTATGCGCAG CGCTTCCGCT TCGAGCCGAT CACCTGGCTC
TCGGCCATCG CCGCAGCCAC CAGCCGCATC GGCCTGATCG GGACGGCCTC GACCACCTAT
CACGAGCCCT ACAATCTGGC GCGGCTATAC GCCTCGCTCG ATCATCTCAG CGGCGGTCGC
GCCGGCTGGA ACATCGTCAC CACCAGCGCG CCGCAGGCGG CGCAGAATTT CGGCCTGCCC
GAGCATCCTG ATCATCACGA GCGTTACGAG CGCGCCAAGG AGTTCCTCGA CGTCGTCACC
GCGCTGTGGG ACAGCTGGGA GGACGACGCC GTCGTCAATG ATCCGGCGTC CGGCATCTTT
GCCGATACCG ACAAGGTCCA TCCGCTCAAC CACGTCGGCA AGCATTTTCG CGTGCGCGGG
CCGCTCAACG TACCGCGCTC GCCGCAGGGC CGGCCGGTCT ATGTCCAGGC CGGCTCGTCC
GAGGACGGCC GCGCCTTTGC AGCGCGCTTT GCGGAGGCGA TCTTCACCGC GCACCAGACG
CTGGCTAGCG CCCAGGAGTT CTATGCCGAT ATCAAGCGCC AGGCGCGGGC GCTCGACCGC
AATCCCGATC ACGTCAAGAT CCTGCCCGGC ATCAGCCCGT TCATCGGCTC GACCCAGGCC
GAGGCCGATC GGCTGCAGGA GGAGTTCAAC GACCTGATCC AGCCGGAGTA CTCGCTGGTA
CAGCTGCGCC AGATGTTGGG GCTCGATCTC TCGGGCTTCG ATCTCGATGG TCCGTTCCCG
CGCCATCTGA TCGAAACCGA CGGCGCGCGT GGCGTCGCCA GCCGTTTCAA GCTCGTGGTC
GACATCGTCG ACCGCGAGAA GCCGACGATC CGGCAGCTCA TCCAGCGCCT CGCCGGCGCC
CGCGGCCATT GGGTGATCGC CGGCCCGCCG GAGAAGATCG CCGACAACAT CCAGACCTGG
TTCGAGAACG GTGCCGCCGA CGGCTTCAAC GTGATGCCGC CCTGGCTGCC CGGCGGCTTC
GATCTGTTTG CCGAGCACGT CGTGCCGATC CTGCGCAAGC GCGGCCTGTT CCGCGAGGAG
TATTCCGGCA AGACCCTGCG CGAGCACTAC GGCCTGGAGC GGCCGGCCAG CCTCTACAGC
CATCAGGTCC AGGCGATCGC CTGA
 
Protein sequence
MSQRRQLNLN LFIYPGGHHE AAWRYKGSAA SRALDISYYQ QLARTAEHYT FDAIFFADGP 
ALADNVRYAQ RFRFEPITWL SAIAAATSRI GLIGTASTTY HEPYNLARLY ASLDHLSGGR
AGWNIVTTSA PQAAQNFGLP EHPDHHERYE RAKEFLDVVT ALWDSWEDDA VVNDPASGIF
ADTDKVHPLN HVGKHFRVRG PLNVPRSPQG RPVYVQAGSS EDGRAFAARF AEAIFTAHQT
LASAQEFYAD IKRQARALDR NPDHVKILPG ISPFIGSTQA EADRLQEEFN DLIQPEYSLV
QLRQMLGLDL SGFDLDGPFP RHLIETDGAR GVASRFKLVV DIVDREKPTI RQLIQRLAGA
RGHWVIAGPP EKIADNIQTW FENGAADGFN VMPPWLPGGF DLFAEHVVPI LRKRGLFREE
YSGKTLREHY GLERPASLYS HQVQAIA