| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3270 |
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| Symbol | |
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| ID | 5153847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3425339 |
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| End bp | 3426352 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558134 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| Protein accession | YP_001239281 |
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| Protein GI | 148254696 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.243033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG GGACGACGCG TCGGCAATTG ATCACGGCAG CTGCTGCTCT GCCTTTCACA
TTCGCGATCT CGCGCTACGC GAAGGCGGCG GAGTTCACGA TGAAGCTCGC GACCGGGCAG
GATCCGTCGC ATCCGGTCAA CAAGCGGGCG CGAGAGGCCG CCGACCGCAT CAAGGACGCC
AGCGGCGGCC GCCTGGAGAT CAATCTCTAT CCGGCCAATC AGCTCGGATC GGATACGGAC
TTGATCTCGC AGGTCCGGGT CGGCGCGGTC GACGCGATCA ATATCGCGAG CTCCGTGCTC
GCTACGCGCG TGCCGCTCGC CGGCATCGTC AACACCGGCT TTGCCTTCTC CTCCTACGAT
CAGGTGTGGA AGGCGATGGA CGGCAGCCTC GGAGATCATA TCCGCAAGGA CATCGAGAAG
ACCGGCGCGA TCGCGCTCTC CAAGCCCTGG GACAATGGCT TCCGCCAGGT CACGTCCTCG
ACCCGTGAGA TCAGGACACC GGACGATCTC AAGAGCTTCA AGATTCGCGT GCCGGCTGCG
CCGATCCTGA CAAGCCTGTT CCAGGCCCTC GGCGCCGGTC CGACACCGAT CAATTTCAAC
GAGGTCTACA CGTCGCTGCA GACCAAGGTG GTCGAGGGGC AGGAAAACCC GCTGCCGATC
ATCGCCACCG CCAAGCTCTA CGAGGTCCAG AAATACTGCT CGCTCACCAG CCACGTCTGG
GACGCCTATT GGATTCTCTG CAACCGCGCT GCGTTCACGC GGCTGCCCGC CGATCTGCAG
GCGATCGTCA CGCGCGAGTT CAACGCATCG GCCGACGACG AGCGCGCCGA TATTGCCGCG
CTGAGCCAGA GCCTGCGTGC CGACTTGGCC GCCAAGGGCT TCACCTTCGT CGATGTCGAC
AAGACCGCGT TCCGTGCCGC GCTCGGCAAG AGCAGCTTCT ACAAGGATTG GCGCGGCAAG
TTCGGCGAGG AGGCCTGGAC GATCCTGCAG TCGAATGTGG GAGAGCTCGG ATGA
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| Protein sequence | MRKGTTRRQL ITAAAALPFT FAISRYAKAA EFTMKLATGQ DPSHPVNKRA REAADRIKDA
SGGRLEINLY PANQLGSDTD LISQVRVGAV DAINIASSVL ATRVPLAGIV NTGFAFSSYD
QVWKAMDGSL GDHIRKDIEK TGAIALSKPW DNGFRQVTSS TREIRTPDDL KSFKIRVPAA
PILTSLFQAL GAGPTPINFN EVYTSLQTKV VEGQENPLPI IATAKLYEVQ KYCSLTSHVW
DAYWILCNRA AFTRLPADLQ AIVTREFNAS ADDERADIAA LSQSLRADLA AKGFTFVDVD
KTAFRAALGK SSFYKDWRGK FGEEAWTILQ SNVGELG
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