| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3248 |
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| Symbol | |
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| ID | 5152335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3402639 |
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| End bp | 3404408 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558114 |
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| Product | branched chain amino acid ABC tranpsorter permease/ATP-binding protein |
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| Protein accession | YP_001239261 |
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| Protein GI | 148254676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.425684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTC TTCACGTCCA GCTGGCGGCA ATGGTGGCGA TGCTGTGCCT TGCTGCCGCG
CCCTTCCTCC TGCCCCCGTT CACGATCACG CTGATGAACT ATATCGGCGT GTATTCGCTG
GTCGCGATCG GCCTCGCGCT TCTCACCGGC GTCGGCGGCA TCGTCTCGTT CGGACAGGCG
GCTTTCGTCG GGATCGCGGC CTATGCCACC GCCTGGGTGT CGGCCCTCAA CGGACAATCC
CCCTGGGTCG GCCTCCTCCT GGCGTTGACG CTGACCTGCA GCATCGCGAC CCTGCTCGGG
CTCGCCACCC TTCGGCTGCA GGGGCATTTC CTTTCGCTCA GCACGGTGGC ATGGGGGCTC
GCGATCGGCT TCCTGTTCGG CAATGTGGAA GGGCTCGGAC GCTTCAACGG CATCGCATCG
ATTCCGCCGA TCAGCTTCGG GTCCTATGCC CTGGTCTCCA GCGCGCAGGT CTATTTCCTG
ATCTGGGGCA TCGTCGCAGC CGTTCTCTGG ATCGGATATA ATCTGCTGGA CTCGCGCCTC
GGCCGCGCGA TGCGCGCGTT GCGGGGCGGC AATACGCTGG TCGAGAGCCT CGGCATCAGT
GCGTTCCGGA TCAAGCTGCT GATCTTCGTC ATCGCGGCGT TTCTGGCGGC CCTGTCCGGC
TGGCTCTACG CCCATATGAG CCGTTTCATC AGTCCCGGCC CATTCGATGC CGGCATGGGC
ATCGAATACC TCATGATGTC GATGGTCGGC GGCGCAGGAA GTCTGCTTGG GGGCGTCGTC
GGCGCCGCGA TCGTGACGCT GCTCAAGAAC AGCGTCCAGG ACTATCTGCC ATTGATCGCC
AAGGGGGCAT CCGGCCAGCT TGAGATCGTC GCCTTCTCCG CGCTGTTCAT CCTGTTCCTG
CAATGGGCCC GGCAGGGAAT CGTGCCATTC GTCGGGCGCT ATCTGCCGAA GCTGCGTCGC
GACCGGCCGC AACCCGCCCC TGCCCTGCCG CGCCGTGCAC AGCCTGCGCC TGGAGAGCTG
CTGCTCAAAG TGGACGGTGC CGAGCGACGT TTCGGCGGCC TTGTCGCCGT GAACAATGTG
AGCTTCGACG TGCGCTCCGG GGAGATCCTG GCCGTGATCG GGCCGAACGG CGCCGGCAAG
AGCACCATGT TCAACTGTCT GACGGGCGCG CTCCGCGTCA ACAAGGGCGA CATCGTCTTT
GCTGGACGCT CGATCACCCG TGAGGCGCAA TCGCGGATCG CCAAGGCGGG CATCGCCAGA
ACGTTTCAGC ACGTCAAGCT CAGGCCGCGG ATGAGCCTGC TCGAAAACGT GATGCTCGGC
ACCTATGCTC GGACCCGCAC CGGCCTGCTC GCGAGCGCCT TGCGCCTCAA CCGGCGCGAG
GAGGCCAGTG CGCAGTTCGA AGCGCTGCGT CAGTTGGAGC GCGTCGGGCT CGGCGACAAG
CCGTTCGACA TCGCCGGCAA CCTGCCGCTC GGCAACCAAC GCATCCTGGA GATCGCGCGG
GCCCTCGCCG CGGACCCGGC GCTGCTGGTG CTCGACGAAC CGGCTGCCGG ACTTCGCCGC
CAGGAGAAGC TGCGGCTGGC CGAACTGCTC AGGTCGTTGC GGAATGACCA CCTGACCATC
CTGATCGTCG AGCACGATAT GGAGTTCGTG ATGTCCTTGG TCGATCGCAT CGTCGTGCTC
GATTTCGGAT CCAAGCTCTG CGAAGGCGAC CCCGCCGCGA TCCGGAACGA CGAGCGGGTT
CAAGAAGCCT ATCTCGGAGG CGTCGCGTGA
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| Protein sequence | MTRLHVQLAA MVAMLCLAAA PFLLPPFTIT LMNYIGVYSL VAIGLALLTG VGGIVSFGQA
AFVGIAAYAT AWVSALNGQS PWVGLLLALT LTCSIATLLG LATLRLQGHF LSLSTVAWGL
AIGFLFGNVE GLGRFNGIAS IPPISFGSYA LVSSAQVYFL IWGIVAAVLW IGYNLLDSRL
GRAMRALRGG NTLVESLGIS AFRIKLLIFV IAAFLAALSG WLYAHMSRFI SPGPFDAGMG
IEYLMMSMVG GAGSLLGGVV GAAIVTLLKN SVQDYLPLIA KGASGQLEIV AFSALFILFL
QWARQGIVPF VGRYLPKLRR DRPQPAPALP RRAQPAPGEL LLKVDGAERR FGGLVAVNNV
SFDVRSGEIL AVIGPNGAGK STMFNCLTGA LRVNKGDIVF AGRSITREAQ SRIAKAGIAR
TFQHVKLRPR MSLLENVMLG TYARTRTGLL ASALRLNRRE EASAQFEALR QLERVGLGDK
PFDIAGNLPL GNQRILEIAR ALAADPALLV LDEPAAGLRR QEKLRLAELL RSLRNDHLTI
LIVEHDMEFV MSLVDRIVVL DFGSKLCEGD PAAIRNDERV QEAYLGGVA
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