Gene BBta_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3237 
Symbol 
ID5153331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3391269 
End bp3392885 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content65% 
IMG OID640558103 
ProductATP-dependent AMP-binding family protein 
Protein accessionYP_001239250 
Protein GI148254665 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.402279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACTT CTCCTTCCGT CTACGCCCGC TTTCGCGACA CCGCGCTGCG GTTCGGTCCA 
TCGGCATTTC TCAACGTGCT GACGGAGACC GCCGCGAATT ACGGCATCGC GCCCGGCGAG
ATCAGCTATG CCACCATGCT CGCGCGGGTG GACGCGAGGC AGGCTGCGTT CGCAGAACGG
GGCTATGGCG AGGGCCATCG GGTCGGGCTG CTGCTTCAGA ACAGACCGGT CTTCGTCGAG
CTGTGGTTCG CGCTCAACGC GCTCGGGGTC TCGGTCGTCC CGATCAACCC GGATCTCCGG
CTCAGCGAGC TCGAATACAT CATCGCGCAT TCAGACATGA ATGCGGCCTT CGTCCTCGCC
GAACGGCGCG AGGAGGTGGA GGCGGCTGCG CGCAATGCCG GCCGTCCAAT CCCGGTGGTG
ACGGTCGAGG ACGACATCCC CGCGCCGTTT GGCGGCCCGC ATCCGTCTCG GGCCGGCGAT
GCATCTTCCG AATGCGCATT GCTGTATACG TCGGGGACGA CAGGTCAGCC GAAGGGCTGC
GTGCTCACCA ATACCTACTA CCTCTACAGC GGAGACTGGT ATCGGGACGT CGGCGGGTTG
ATCGATCTCA GGACTGGTCG CGAGCGGATG ATCACGCCGT TGCCGCTGTT TCACATGAAC
GCCATGGCCG TATCGCTGAT GGCGATGTTG TCGGTCGGCG GCTGTCTCAC GATGCTGGAT
CGCTTCCATC CGCGCTCCTG GTGGGACTCG GTCAAGGAAA GCCGCGCGAC CTGCCTGCAC
TATCTGGGCG TCATGCCGTC GATGTTGATG AGCGCGCCGG CATCGGCGGA GGATCGCGCG
CATTCGGTGC GCTTCGGCTT CGGGGCCGGC GTGGACAAGC TCCTGCATGC GCCGTTCGAG
GAGCGTTTCG GCTTCCCGCT GCTGGAAGCC TGGGCGATGA CCGAGACGGG AAGCGGCGGC
GTCATCGCCG CCAATGTCGA GCCGCGCAAG GTCGGCACCA GCTGCTTCGG GCGGCCGTCC
GCTGACATCG AGATCCGCAT CGTCGATGAC AGCGGCAAAG AGACGCCGGC GGGATCGCCG
GGCGAATTGC TGGTGCGGCG GGCGGGCCCG GATCCGCGCT ACGGCTTCTT CCGGGAATAT
CTGAAGAACC CGGAAGCCAC CGCGGAAGCG TGGCAGGGCG GATGGTTTCA TACCGGTGAT
ATCGTCTCCC GCGACGACGA TGGCGATCTG CATTTCGTCG ATCGCAAGAA GAACGTCATC
CGCCGATCGG GCGAGAATAT TGCCGCGGTC GAGGTCGAGT CGGTCCTCAA CCGCCATCCT
GCAGTCCGGC AGGCCGCGGT GGCAGCGACA CCTGACAAGG TTCGTGGCGA CGAGGTCGCG
GCGGTCATCA TTGCGGAGCA GGGCGGTGCG GACCGCAAAC TGGCCGAGGA GATCGTCCGC
TGGAGTCTCG CGCAGATGGC CTATTACAAG GCTCCGGGCT GGATCTGCTT CGTGGACCGT
TTGCCGTTGA CGGCAACCGA GAAGATCCAG CGCGGCGGAC TGAAGGATCA CGTCGCCAGA
CTGATGCAGG ATGGTGCGTT CTTCGATCTG CGTGATCTCA AGCGGCGGCA GGTGTGA
 
Protein sequence
MTTSPSVYAR FRDTALRFGP SAFLNVLTET AANYGIAPGE ISYATMLARV DARQAAFAER 
GYGEGHRVGL LLQNRPVFVE LWFALNALGV SVVPINPDLR LSELEYIIAH SDMNAAFVLA
ERREEVEAAA RNAGRPIPVV TVEDDIPAPF GGPHPSRAGD ASSECALLYT SGTTGQPKGC
VLTNTYYLYS GDWYRDVGGL IDLRTGRERM ITPLPLFHMN AMAVSLMAML SVGGCLTMLD
RFHPRSWWDS VKESRATCLH YLGVMPSMLM SAPASAEDRA HSVRFGFGAG VDKLLHAPFE
ERFGFPLLEA WAMTETGSGG VIAANVEPRK VGTSCFGRPS ADIEIRIVDD SGKETPAGSP
GELLVRRAGP DPRYGFFREY LKNPEATAEA WQGGWFHTGD IVSRDDDGDL HFVDRKKNVI
RRSGENIAAV EVESVLNRHP AVRQAAVAAT PDKVRGDEVA AVIIAEQGGA DRKLAEEIVR
WSLAQMAYYK APGWICFVDR LPLTATEKIQ RGGLKDHVAR LMQDGAFFDL RDLKRRQV