Gene BBta_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3189 
Symbol 
ID5151658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3339043 
End bp3339849 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID640558054 
ProductGntR family transcriptional regulator 
Protein accessionYP_001239207 
Protein GI148254622 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CTCGCGGCAA AGCCGATCGC GTTGCGCAGA AGACCCCGGC CCGGAGCAAG 
GTCCGGCGCC GGCCGGCGCC GCGGCCGGAG TCCGAGCCGG TCGATCCGCG GCGGATGGAT
GACGATCCGG TCGTGCAGGG CATTCTCACG GCGATCAGCC AGAAGCGGCT GAAGCCGGGG
ACCAAGCTCG GCGAGGACCG GCTGGCGCGC GCGCTTGGCA CCACGCGCAT CCACATCCGC
CAGGCGCTGG CGCATCTCGC CTCGCGCAAG ATCGTCGTGC AGTTTCCGAA CCGCGGCGCC
TTCGTCTACC GGCCGACCTG GGAGGAGGCG CGCGAGATGT TCGCCGCCCG CCGCGTCATC
GAGGCGGCGA CGGTGGCAGC CGCCATCGAC CGGCTCGACA AGCCCGGCAA GGTGCTGCTG
AAGGCGCATA TGGCGCGCGA GGCGGCCGAT GACCGCAGCG ATCGTTGGGC CTCACTGTCG
CTGACGGCGG AATTCCACAT CCTGATCGCG CAGCTCGCCG GCAACCATGT GCTGCTCGAC
ATGGCGCGCG AGCTGATCCT GCGCACCTCC CTGGCGATCG CGACGTTCGA GCAGCCCGGC
GCGCCCGACT GCTCGCCGGA TTCGCACCCC GACATCGGCG AGCTGGTGTT GGCGCGTGAC
AAGGCCGCGG CGGTCGCCGC CATGACGCAT CATCTCGATG ACATCGAGCG CCGCATCCAG
CCGCGGCAGG CTGACGGCGA GGTCGATGAG CTGACGGAGA TCTTCAAGGA TCTCGGCGTC
AGGCCGGCCG CGCGCCATGA CAGCTGA
 
Protein sequence
MIKTRGKADR VAQKTPARSK VRRRPAPRPE SEPVDPRRMD DDPVVQGILT AISQKRLKPG 
TKLGEDRLAR ALGTTRIHIR QALAHLASRK IVVQFPNRGA FVYRPTWEEA REMFAARRVI
EAATVAAAID RLDKPGKVLL KAHMAREAAD DRSDRWASLS LTAEFHILIA QLAGNHVLLD
MARELILRTS LAIATFEQPG APDCSPDSHP DIGELVLARD KAAAVAAMTH HLDDIERRIQ
PRQADGEVDE LTEIFKDLGV RPAARHDS