Gene BBta_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3171 
SymbolcyoB 
ID5150718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3321045 
End bp3323045 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content61% 
IMG OID640558038 
Productcytochrome o ubiquinol oxidase, subunit I 
Protein accessionYP_001239191 
Protein GI148254606 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02843] cytochrome o ubiquinol oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.404396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0592526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA AGCTCGATTG GTCGGCGATA CCGTTGGGCC AGCCCATTCC ACTCGTCGCC 
GCCGGTCTGG TGCTGGTTGC TATTCTGGGC GTCCTCATCT GGGTGTTTGC CAAGGGGTAT
TTCCCCTATC TCTGGCGTGA ATGGATCACC AGCGTCGACC ATAAGCGGAT CGGGGTGATG
TACATCCTGC TCGCTTTCGT CATGCTGCTG CGCGGCGGCA CTGACGCCAT CATGATGCGC
ACGCAGCAGG CCGTCGCTTT CCATTCCAAC GGTTACCTGC CGCCGGAGCA TTACAACCAG
ATCTTTTCCG CGCATGGCAC GATCATGATT TTCTTCGTGG CGATGCCGTT CGTGGTCGGG
CTGATGAATC TCGTCGTGCC GCTGCAACTC GGTGTCCGCG ACGTTGCCTT TCCGACCCTG
AACTCCGTGG GATTCTGGCT TACCGCGACC GGTGCGTTGC TGGTCAACGT CTCGCTCGTG
GTCGGCGAGT TCGCCCGCAC CGGCTGGCTG CCGTTCCCGC CGCTGTCGGA GCTCACCTAT
TCGCCTGGCG TCGGTGTCGA TTATTATATC TGGGCGCTCG AGATCTCCGG GGTAGGGACG
CTCGTCAGCG GTATCAACCT CGTCACGACC GTGCTCAAGC TGCGTACTCG GGGCATGAGC
TATCTGCGCA TGCCGATGTT CTGCTGGACC ACGCTGGCCG CCAATCTGCT GATCGTTGCG
GCGTTTCCGA TCCTGACGGC GACGCTGACG ATGTTGATGC TCGATCGCTA TTTCGGCTTC
CACTTCTTCA CCAACGAGGC CGGCGGCAAC ATGATGATGT TCATGAACCT GATCTGGGCC
TGGGGCCATC CCGAGGTCTA CATTCTGGTG CTGCCGGCCT TCGGCATCTA CTCGGAAGTG
GTTGCGACGT TCTCCAGTAA ATCGCTGTTC GGCTATCGAT CGATGGTGCT GGCGACGATG
GCGATCTGCG TCGTCTCCTT CATGGTCTGG CTGCATCATT TCTTCACGAT GGGCGCGGGG
CCGGACGTCA ACGCGATCTT CGGCATTGCC AGCATGATCA TCGCGGTGCC CACGGGGGTG
AAGATCTACA ATTGGCTGTT CACGATGTAT GGCGGCCGGG TGCGGTTCAC GACGCCGATG
CTGTGGTCGG TCGGCTTCAT GATCACGTTC ATGATCGGTG GATTGACCGG GGTGCTCGTC
GCGGTGCCGC CGGCGGATTT CCTGTTGCAC AACAGTCTTT TCCTGGTGGC CCACTTCCAC
AACGTGATCA TCGGCGGAGT CCTGTTCGGC GTCTTTGCCG GCGTCACCTA CTGGTTTCCG
AAGGCGTTCG GCTTCCGTCT GTATGAAAGC TGGGGCAAGG CGGCTTTCTG GTTCACCCTG
ATCGGCTTCT ACATGACCTT CATGCCGCTC TACGTCGTGG GGCTGCTCGG CATGACCCGG
CGCATGCAGC ACTACGATGT CGCCGAATGG CGGCCCTGGC TGGCGGCGGC GACCTTCGGC
ACGGCGTTGC TCGCGATCGG TGTCGTTCTT CAAATCCTCC AACTCGTGTT CAGCATCCGC
GACCGGGAAC GTCTGCGCGA CACCACCGGC GACCCCTGGG ACGGCCGCTC GCTGGAATGG
GCGACATCGT CGCCGCCGCC GGTGTTCAAT TTCGCGGTGC TGCCGAATGT CACCGGGCAG
GACGCGTATT GGCGGATCAA GGAAAACGCC AAAAACCAGC AGCTCCAGAC CAGAGAAAGG
GACTATGAGG ACATTGAGCT GCCGAGAAAT TCTCCCACCG GCTTTGTCTG CGCCTTCTTC
GCCACGATCA TGGGCTTTGC GTTGATCTGG CACATCTGGT GGATGGTGGC GCTCGGTGCA
ATAGGGGCCT TCGCGACGTT CGTCGTGTTC GCCTGGCGCG ATCACGAAGA GTATGTGATT
CCAGCAGCAG AGGTCGCCCG GATTGACCGC GGCATCATTG AAGCGCGGCA GGGATTATCG
TCCGCGGCGC ACGGCACGTG A
 
Protein sequence
MLGKLDWSAI PLGQPIPLVA AGLVLVAILG VLIWVFAKGY FPYLWREWIT SVDHKRIGVM 
YILLAFVMLL RGGTDAIMMR TQQAVAFHSN GYLPPEHYNQ IFSAHGTIMI FFVAMPFVVG
LMNLVVPLQL GVRDVAFPTL NSVGFWLTAT GALLVNVSLV VGEFARTGWL PFPPLSELTY
SPGVGVDYYI WALEISGVGT LVSGINLVTT VLKLRTRGMS YLRMPMFCWT TLAANLLIVA
AFPILTATLT MLMLDRYFGF HFFTNEAGGN MMMFMNLIWA WGHPEVYILV LPAFGIYSEV
VATFSSKSLF GYRSMVLATM AICVVSFMVW LHHFFTMGAG PDVNAIFGIA SMIIAVPTGV
KIYNWLFTMY GGRVRFTTPM LWSVGFMITF MIGGLTGVLV AVPPADFLLH NSLFLVAHFH
NVIIGGVLFG VFAGVTYWFP KAFGFRLYES WGKAAFWFTL IGFYMTFMPL YVVGLLGMTR
RMQHYDVAEW RPWLAAATFG TALLAIGVVL QILQLVFSIR DRERLRDTTG DPWDGRSLEW
ATSSPPPVFN FAVLPNVTGQ DAYWRIKENA KNQQLQTRER DYEDIELPRN SPTGFVCAFF
ATIMGFALIW HIWWMVALGA IGAFATFVVF AWRDHEEYVI PAAEVARIDR GIIEARQGLS
SAAHGT