| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3079 |
|---|
| Symbol | |
|---|
| ID | 5151521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3221483 |
|---|
| End bp | 3222184 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640557949 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001239103 |
|---|
| Protein GI | 148254518 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA GGGGCCGGGA AACCCAGATG GACGAGCTGC AGACATCGGC GCGCATCCGC
GTGTTCTTTG CCGACGATCA CCCGATCGTG CTCGACGGCA TCAAGGCGCT GATCGCCGAG
GACGCGCAAT TGGACCTGGT CGGATCGGCG CTCGACGGCC CGACCGCGCT GCGGCGGGCC
ATCGACCTGC GGCCCGACGT GGTGGTGCTG GATCTCTCGA TGCCCGGCAT GAGCGGCATC
GAGGTGGCGC GGAAGCTGCT GGCCGCCTGT CCCAGCAGCC GCGTGCTGCT CTTGACCGTG
CACGAGGACG CCGCCTATTT CCGCCAGGCG CTCGAGATCG GCATCGTCGG CTATGTCCTG
AAGCGCACGG CCACCGAGGA GCTGAACCGT GGCATTCACG CGGTCGCCGC CGGCGCGGTC
TATCTCGATC CCGCGATCGC CGAGCGCGCG CTCGGGACGG CGGCGCGGCA GATCCCGATC
CGCGCCGACG CGCTCTCCGG CGTCGAGCTC AGCCTGCGCG AGGCCGAAGT GGCGCGGCTG
ACGGCGGCCG GATACAGCGC CAAGACCATC GCGCTGAAAC TGCAGATCGG CGTCAAGAGC
GTCGAGACCT ACAAGAAGCG CTGCATGACC AAGCTCGGCT TCCAGAGCCG GGTCGAGCTG
ATCCACTACG CCATCGGCAA GGGCTGGCTG AGCGCGCCAT GA
|
|---|
| Protein sequence | MATRGRETQM DELQTSARIR VFFADDHPIV LDGIKALIAE DAQLDLVGSA LDGPTALRRA
IDLRPDVVVL DLSMPGMSGI EVARKLLAAC PSSRVLLLTV HEDAAYFRQA LEIGIVGYVL
KRTATEELNR GIHAVAAGAV YLDPAIAERA LGTAARQIPI RADALSGVEL SLREAEVARL
TAAGYSAKTI ALKLQIGVKS VETYKKRCMT KLGFQSRVEL IHYAIGKGWL SAP
|
|---|
| |