| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3032 |
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| Symbol | degP |
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| ID | 5156163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3168096 |
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| End bp | 3169193 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640557904 |
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| Product | Serine protease do-like precursor |
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| Protein accession | YP_001239058 |
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| Protein GI | 148254473 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.722688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTC TGCGTTGTGT CCGGCCTTTG GTTCTGCTGC CGGCGATCGT GCTCTCCCTC
CTGGCTGCCC CTGCCCTCGC CCAGATCCCG GACCTCAAGC TCGGCCGCGT GCCGACCTTG
GCGCCACTGG TCAAGGAGGT CACCCCGGCC GTCGTCAACA TCTCGGTCGA AGGCAAGGTC
CGGCAGGACA ATCCGCTGTA CCAGGACCCG CTGTTCCGCG AGTTCTTCGA CGTTCCGAAA
CAGGTCGAGA AGCAGATCAG CGCCACCGGC TCCGGCGTCA TCGTCGATGC GCAGCGCGGC
TACGTGATGA CCGCCAATCA CGTCGTCGAG CATGTCAGCA CCGCACAAAT CCGGACCAAG
GACGGCCGCA AATTCTCCGC CCGCCTGGTC GGGCGCGATC CCGCCACCGA CATCGCGGTG
CTGCAGATCA AGGATCCGAC CGAGCTCAAG GCGATCGCGC TTGGCGACAG CGATGCGCTC
GAGGTCGGCG ACTTCGTGAT CGCGGTCGGC AACCCGTTCG GCCTCGGACA GACCGTCACC
TCCGGCCTCG TCAGCGCGCT CGGGCGAACC GGGCTCGGCA AGCAGGGCTA TGAGGATTTC
ATCCAGACCG ACGCCGCGAT CAATCCCGGC AATTCAGGCG GGGCGCTGAT CAACCTCCGC
GGCGAACTGG TCGGCATCAA CACCGCGATC ATCTCGCCGG GCGGCGGCAA TGTCGGCATC
GGCTTTGCCG TGCCGATCAA CATGGCGCGA CGGGTGATGG AGCAACTGGT CGCCAACGGC
CGCGTCGACC GCGGACGCAT CGGGGTCACC CTGCTCGATC TGGATTCGCC GGCCGATGGC
CGCGTCCAGG GCGCCCGCGT CGCCGATGTG ACCGTCGGCT CCCCGGCCGA GCGGGCCGGA
CTGCGCAAGG GCGACATCAT CGTGAAGGCG AACGACATGC CGGTGCGCAG CGCGACGCAG
GTTCGCAATC TCATCGGGCT GACGCCGGTC GGCCAACGCG TCCGCCTCGT GTTCGAGCGC
GACCGCGCGC TCGGCAATGC GACGGTCGAG GTCGCGCCGG TTACCGAAGA ACGCGCCCGC
GCGCGAAGCT CGGGCTGA
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| Protein sequence | MQILRCVRPL VLLPAIVLSL LAAPALAQIP DLKLGRVPTL APLVKEVTPA VVNISVEGKV
RQDNPLYQDP LFREFFDVPK QVEKQISATG SGVIVDAQRG YVMTANHVVE HVSTAQIRTK
DGRKFSARLV GRDPATDIAV LQIKDPTELK AIALGDSDAL EVGDFVIAVG NPFGLGQTVT
SGLVSALGRT GLGKQGYEDF IQTDAAINPG NSGGALINLR GELVGINTAI ISPGGGNVGI
GFAVPINMAR RVMEQLVANG RVDRGRIGVT LLDLDSPADG RVQGARVADV TVGSPAERAG
LRKGDIIVKA NDMPVRSATQ VRNLIGLTPV GQRVRLVFER DRALGNATVE VAPVTEERAR
ARSSG
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