Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2976 |
Symbol | |
ID | 5154651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3102910 |
End bp | 3103692 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640557852 |
Product | hypothetical protein |
Protein accession | YP_001239006 |
Protein GI | 148254421 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.458686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGCG ACGATGCCGA AATCCTGATC CACGCGCTGG CCGATGGCGA GCTCGATGCC GGCCATGCCC GGGAGGTCGA GGCCCATATT GCCGCCTGCC CGCGCTGCGC TGCCGAGCTA ACTGCGATCA GGCAGATGAA GCAGGCGCTG GCCGGCGCTG ACCTGATCAC GAAGGCGCCC GCCGCCTTGC GCCTGCGCAT CGAAGCTGCG CTGCCTGCCG CTGCTGCGGC GTCGATCACG CCGCTCGCCG CGGTGCCGAG CCGGCGCACG CTGCTGAAGG GTTTTGCGAT GGGCTCGGCC GTGTCGGCGT TGGCCGCCAC CGGTCTCGTC GCGATCGTGT TGCGCAACGA CGACCAGCAA CGGATCGAGG CCGAGATCGT CTCGGCGCAT CTGCGCTCGC TGCAGGCGGG TCACCTGACC GATGTGATCT CGACCGATCA GCACACCGTC AAGCCCTGGT TCAACGGCAA GCTCGACGTC GCGCCGCCGG TGATCGACCT CACCGCACAG GGCTTCACTT TGATCGGCGG CCGGCTCGAT TACGTCGACG CGCGCCCGAT CGGCGCCGTC GTCTATCGCC GGCGCCAGCA CGTCATCAAT CTGTTCGTGG CGCAGACATC GTCCACTGCA CGCCGCGCGT CACGGCTGGA GACGATCCAA GGCTTCAACA TCCGCAGCTG GCGCGACCGC GGCCTGAGCT ATTGGGCGGT CAGCGACATC AATCCGGACG AGCTCAATGA GTTCGGCGAA CGCTTCGAGC GCACGATGGG GGGGAGCGGC TGA
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Protein sequence | MTCDDAEILI HALADGELDA GHAREVEAHI AACPRCAAEL TAIRQMKQAL AGADLITKAP AALRLRIEAA LPAAAAASIT PLAAVPSRRT LLKGFAMGSA VSALAATGLV AIVLRNDDQQ RIEAEIVSAH LRSLQAGHLT DVISTDQHTV KPWFNGKLDV APPVIDLTAQ GFTLIGGRLD YVDARPIGAV VYRRRQHVIN LFVAQTSSTA RRASRLETIQ GFNIRSWRDR GLSYWAVSDI NPDELNEFGE RFERTMGGSG
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