Gene BBta_2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2976 
Symbol 
ID5154651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3102910 
End bp3103692 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID640557852 
Producthypothetical protein 
Protein accessionYP_001239006 
Protein GI148254421 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.458686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCG ACGATGCCGA AATCCTGATC CACGCGCTGG CCGATGGCGA GCTCGATGCC 
GGCCATGCCC GGGAGGTCGA GGCCCATATT GCCGCCTGCC CGCGCTGCGC TGCCGAGCTA
ACTGCGATCA GGCAGATGAA GCAGGCGCTG GCCGGCGCTG ACCTGATCAC GAAGGCGCCC
GCCGCCTTGC GCCTGCGCAT CGAAGCTGCG CTGCCTGCCG CTGCTGCGGC GTCGATCACG
CCGCTCGCCG CGGTGCCGAG CCGGCGCACG CTGCTGAAGG GTTTTGCGAT GGGCTCGGCC
GTGTCGGCGT TGGCCGCCAC CGGTCTCGTC GCGATCGTGT TGCGCAACGA CGACCAGCAA
CGGATCGAGG CCGAGATCGT CTCGGCGCAT CTGCGCTCGC TGCAGGCGGG TCACCTGACC
GATGTGATCT CGACCGATCA GCACACCGTC AAGCCCTGGT TCAACGGCAA GCTCGACGTC
GCGCCGCCGG TGATCGACCT CACCGCACAG GGCTTCACTT TGATCGGCGG CCGGCTCGAT
TACGTCGACG CGCGCCCGAT CGGCGCCGTC GTCTATCGCC GGCGCCAGCA CGTCATCAAT
CTGTTCGTGG CGCAGACATC GTCCACTGCA CGCCGCGCGT CACGGCTGGA GACGATCCAA
GGCTTCAACA TCCGCAGCTG GCGCGACCGC GGCCTGAGCT ATTGGGCGGT CAGCGACATC
AATCCGGACG AGCTCAATGA GTTCGGCGAA CGCTTCGAGC GCACGATGGG GGGGAGCGGC
TGA
 
Protein sequence
MTCDDAEILI HALADGELDA GHAREVEAHI AACPRCAAEL TAIRQMKQAL AGADLITKAP 
AALRLRIEAA LPAAAAASIT PLAAVPSRRT LLKGFAMGSA VSALAATGLV AIVLRNDDQQ
RIEAEIVSAH LRSLQAGHLT DVISTDQHTV KPWFNGKLDV APPVIDLTAQ GFTLIGGRLD
YVDARPIGAV VYRRRQHVIN LFVAQTSSTA RRASRLETIQ GFNIRSWRDR GLSYWAVSDI
NPDELNEFGE RFERTMGGSG