Gene BBta_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2971 
Symbol 
ID5152995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3095269 
End bp3096417 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content64% 
IMG OID640557847 
Producthypothetical protein 
Protein accessionYP_001239001 
Protein GI148254416 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0553904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCC CCTTCCACAA GGAACTGCGT ATCGGGGCCT ATCTGATGAA GCAGAAGCTT 
CTCGGCCGCA AACGCTATCC GCTCGTGCTC ATGCTGGAGC CGCTGTTTCG CTGCAACCTG
GCATGTGCAG GCTGCGGCAA GATCGACTAT CCCGACGCGA TTCTCAACCG CCGCATGACG
GCGCAGGAGT GCTGGGACGC GGCCGACGAA TGCGGTGCGC CGATGGTGGC GATCCCCGGT
GGCGAGCCGT TGATCCACAA GGAGATCGGC GAGATCGTGC GCGGCCTGGT GGCGCGCAAG
AAATTCGTCT CGCTCTGCAC CAATGCGCTG CTGCTCGAGA AGAAGCTCGA TCTGTTCGAG
CCCTCGCCCT ATCTGTTCTT CTCGGTGCAT CTCGACGGCC TGCGCGAGCA TCACGACAAG
GCCGTGTCGC AGAAGGGCGT GTTCGATCGC GCCGTGTCGG CGATCAAGGC CGCCAAGGCG
CGCGGCTTCA CCGTGAACGT CAACGCCACC ATCTTCGACA ATCATCCGGC CGAGGAGATC
GCCAAGTTCC TCGACTTCAC CACGGAGCTC GGCGTCGGCG TCACCATGTC GCCGGGCTAT
GCCTATGAGC GCGCGCCGGA CCAGGAGCAC TTCCTGAACC GCACCAAGAC CAAGCAGCTG
TTCCGCGACG TGTTCGCGCT CGGCAAGGGC AAGAAGTGGA ATTTCATGCA TTCCGGCCTG
TTCCTCGACT TCCTGGCCGG CAACCAGGAG TTCGAGTGCA CGCCCTGGGG CATGCCCGCG
CGCAACATCT TCGGCTGGCA GAAGCCCTGC TACCTGCTGG GCGAAGGCTA TACCAAGACC
TTCAAGGAGC TGATGGAGAC CACCGATTGG GACTCCTACG GCACCGGCAA GTATGAGAAG
TGCGCCGACT GCATGGCGCA TTGCGGCTAC GAGGCCACCG CAGCCGACGC AGCGCTGACG
AATCCGCTGA AGGCGATGTG GGTGTCGCTG CGCGGCATCA AGACCGAAGG CCCGATGGCG
CCGGAGATCG ACCTCTCCAA GCAGCGCCCG GCGCAGTACG TGTTCTCGTC CGAGGTGCAG
AAGCGCCTCT CCGAGATCCG CCGCGACGAG GCGATCGAGG CGCAGCAGAA GGCCTCGACC
GCGGCCTGA
 
Protein sequence
MAIPFHKELR IGAYLMKQKL LGRKRYPLVL MLEPLFRCNL ACAGCGKIDY PDAILNRRMT 
AQECWDAADE CGAPMVAIPG GEPLIHKEIG EIVRGLVARK KFVSLCTNAL LLEKKLDLFE
PSPYLFFSVH LDGLREHHDK AVSQKGVFDR AVSAIKAAKA RGFTVNVNAT IFDNHPAEEI
AKFLDFTTEL GVGVTMSPGY AYERAPDQEH FLNRTKTKQL FRDVFALGKG KKWNFMHSGL
FLDFLAGNQE FECTPWGMPA RNIFGWQKPC YLLGEGYTKT FKELMETTDW DSYGTGKYEK
CADCMAHCGY EATAADAALT NPLKAMWVSL RGIKTEGPMA PEIDLSKQRP AQYVFSSEVQ
KRLSEIRRDE AIEAQQKAST AA