| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2967 |
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| Symbol | |
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| ID | 5155117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3091780 |
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| End bp | 3092619 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557844 |
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| Product | putative phytoene synthase |
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| Protein accession | YP_001238998 |
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| Protein GI | 148254413 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGG AGGCGACTGC AGACAGCATC GATCACGGCA CCGCCGCGTC CGGCAGCTCG
TTTTATGCCG CCATGCGCAT CCTGCCGCCG GCCCAGCGCG ATGCGATGTT CCAGGTCTAC
AGCTTCTGCC GCGAGGTCGA CGACATCGCC GATTCCAATG GCCCGCGTTC CGAACGGCTG
GCCGCGCTGC AGAAATGGCG CGACGATATC GACGCGCTGT ATCAGGGCAA CCCGCCGCCG
CGGCTGCGCG ACTACGTCAG TTCGGTGAAG ACGTTCGGGC TGAAGCGGGA AGACTTCCTC
GCCATCATCG ACGGCATGGA GATGGACGTG CCGCAGGAGA TCCGCGCGCC CGATCTCGCC
ACGCTCGATC TGTATTGCGA CCGGGTGGCC AGCGCCGTCG GCCGGCTGTC GGTGCGCATC
TTCGGCATGC CCGAAGAGGA CGGCATCCTG CTGGCTCATC ATCTCGGCCG CGCGCTGCAG
CTCACCAATA TCCTGCGCGA TATCGACGAG GACGCCGGCA TCGGCCGGCT CTATCTGCCG
CGCGAGGCGC TGCTGTTCGC CGGCATCACC GGCGACGATC CAGCGAAAGT CGTGCAGGAG
CGCGCGCTGC CCAAGGTGTG CAACTCGGTT GCCATACGGG CGAAAACGCA TTTCGAAAAG
GCCGACGAGA TCATGCGGCG CAATCGCCGG CGCACCGTGC GGGCGCCGCG GATCATGGCG
AAATATTACC GCGCCGTGTT CGACCTGTTG CTCGAACGCG GTTTTGCCCC GCCGCGTGAG
CCGGTGCGCG TGAGCAAGCT CACGAAGATC GGCATCATCC TCCGTTACGC TTTCATCTGA
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| Protein sequence | MTLEATADSI DHGTAASGSS FYAAMRILPP AQRDAMFQVY SFCREVDDIA DSNGPRSERL
AALQKWRDDI DALYQGNPPP RLRDYVSSVK TFGLKREDFL AIIDGMEMDV PQEIRAPDLA
TLDLYCDRVA SAVGRLSVRI FGMPEEDGIL LAHHLGRALQ LTNILRDIDE DAGIGRLYLP
REALLFAGIT GDDPAKVVQE RALPKVCNSV AIRAKTHFEK ADEIMRRNRR RTVRAPRIMA
KYYRAVFDLL LERGFAPPRE PVRVSKLTKI GIILRYAFI
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